Mangifera indica (mango): 123228546
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Entry
123228546 CDS
T07684
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123228546
Enzymes [BR:
minc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123228546
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
123228546
NCBI-ProteinID:
XP_044509888
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Position
1:22198607..22203648
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AA seq
691 aa
AA seq
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MASWNAKWSWVVALLAMLVQLHFFTGVSSRNIKNTLFRKATKSIKDRNLRESPDVVLNTE
RRRQVVMINGLVEVTLSSPDGEVIGIKYNGIDNVLETDNAQDNRGYWDVVWYKPGEKDNI
DKLEGTNFHVIMADKDQVEISFTKKWNYSRHVPLNVDKRYIMRRGVSGFYAYAILEREPG
WPDVDMDQIRAVFKLQKDRFHYMAISDKRQRIMPMPEDRETGQPLAYPEAVLLTKPINTE
LKGEVDDKYQYSSENKDNKVQGWISANPPVGFWMITPSNEFLSSGPTKQDLTSHVGPTVL
SMFTSIHYGGKDIDTKYRNGEPWKKVLGPVLVYLNQVSSTNNIYGDLWRDAKAQMWKEVE
SWPYDFLQSQDFPKSYQRGNISGQLQVFDRCINSRTTGAKYAYVGLAAPGQVGSWQTETK
GYQFWTQTDEQGNFFLKNVREGDYDLYAWVPGFIGDYKHYTNIAVKAGSEFNLGAIVYRP
PRNGPTLWEIGVPDRSAAEFFVPDPYPTLMNRLYKNDPANKFRQYGLWARYADIYGNNDL
KYTIGISDHTRDWFFAHVTRDIGNRTYQPTTRQIMFELLNVNSRGDYTLQVAMAAASESE
FQLRINDANVDKPDFSTGPMGRDNAIARHGIHGLYRFYSINIPSSKLYKGSNTFYLTQSR
SQTPFQGILYDYIRLEGPPNPQTSSSQNVVA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttggaatgctaaatggagttgggttgttgccttgttagcaatgcttgttcag
ttgcatttcttcacaggagtttcctctcggaatatcaagaacaccctatttagaaaagct
accaagagtataaaagacagaaacctgcgggaatctcctgatgtcgtattgaataccgaa
aggcgaagacaagtggtaatgattaatgggctagtcgaagtcactctgtcgagcccagat
ggtgaagtcataggaataaagtataatggaattgataatgtgttggaaacagataatgct
caggataatcgagggtactgggacgttgtttggtataagccaggagaaaaagacaacatc
gacaaattagaaggaacaaactttcacgtgattatggcagataaagaccaagtagagatt
tcattcacaaagaaatggaattattcccggcacgttcccttaaacgtagacaaaaggtat
ataatgcggcgaggtgtctcaggattttatgcatatgccattctggaacgagaaccaggg
tggccggacgttgacatggatcaaattagagccgttttcaagctccaaaaagacaggttc
cattacatggcaatttcggacaagaggcaaagaataatgccaatgccggaagaccgtgaa
acgggtcagccacttgcctaccctgaggccgttctcctgactaagcccatcaatactgaa
cttaaaggagaggtggatgacaagtaccagtactcatcagaaaacaaagataacaaagta
cagggatggatatcagccaatccgccagtgggtttttggatgatcacacccagtaacgag
ttcctatcatctggtccaacgaagcaagatctcacctcccatgtcggccctaccgttcta
tctatgtttaccagtatacattacggagggaaggatatagatacaaagtatcgaaatggg
gagccctggaaaaaagtactgggtcctgttcttgtctatctgaaccaagtttcatcgact
aacaatatctatggagatctttggagagatgccaaggctcagatgtggaaagaagttgaa
agctggccatatgatttccttcaatctcaagattttcctaaatcatatcaaagaggaaac
atttccggccaattacaagtctttgacagatgtatcaattcgagaacaacaggcgcaaaa
tatgcttatgtgggattggcagcgcctggacaagtgggatcctggcaaacagaaaccaag
ggttatcaattctggacacaaactgacgagcaagggaatttcttccttaaaaacgttcga
gagggggattatgatttgtatgcatgggtccctggatttattggagattataagcattac
actaatattgctgtcaaagctgggtctgagttcaatttgggagccattgtgtatcggcct
cctagaaacggtcctacattgtgggaaatcggtgttcctgatcgctccgctgctgaattt
tttgtgccggacccttatccgacactcatgaaccgactgtacaagaacgatccagcaaat
aagtttaggcagtatggattatgggcaagatatgcagatatatatggtaataatgatctc
aagtacacaattggcatcagtgatcatactagagactggttctttgctcatgttacaagg
gatataggaaatcggacatatcaaccaaccacacgacagataatgtttgagcttctgaat
gtcaatagtcgaggagattacacactccaagtagccatggcagcagcctctgaatcggaa
tttcagcttcgaatcaacgatgcaaatgttgataaacctgatttctcaacagggccaatg
ggaagggacaatgccattgccagacatgggattcatggattgtataggttttatagtata
aatattccaagcagtaaactctacaaaggaagcaacacgttctatcttactcagtcaaga
agccaaacccccttccaagggattttgtatgattacattcgcttagaaggcccccctaac
cctcaaacttcatcaagccaaaatgttgtagcataa
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