Mangifera indica (mango): 123228588
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Entry
123228588 CDS
T07684
Name
(RefSeq) replication factor C subunit 3-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
minc
Mangifera indica (mango)
Pathway
minc03030
DNA replication
minc03410
Base excision repair
minc03420
Nucleotide excision repair
minc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123228588
03410 Base excision repair
123228588
03420 Nucleotide excision repair
123228588
03430 Mismatch repair
123228588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123228588
03036 Chromosome and associated proteins [BR:
minc03036
]
123228588
03400 DNA repair and recombination proteins [BR:
minc03400
]
123228588
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123228588
DNA Replication Termination Factors
ELG1-RFC complex
123228588
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123228588
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123228588
Check point factors
HRAD17(Rad24)-RFC complex
123228588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_16
AAA_11
AAA_30
AAA_14
DNAX_ATPase_lid
AAA_24
AAA_5
DUF815
ATPase_2
RuvB_N
AAA_7
ResIII
AAA_19
bpMoxR
AAA_3
nSTAND3
SLFN-g3_helicase
AAA_35
AAA_25
TIP49
AAA_28
TniB
MCM
Mg_chelatase
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123228588
NCBI-ProteinID:
XP_044509934
LinkDB
All DBs
Position
11:6079599..6083572
Genome browser
AA seq
366 aa
AA seq
DB search
MADTVSLMDVDEDANQNQNQNNTLKSNKGKDVVSAAPPDSKATPWVEKYRPQSLADVAAH
RDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGI
DVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLIC
NHVNKIIPALQSRCTRFRFAPLEPSHVTERLKHVIKAEGLDVTESGLAALVRLCNGDMRK
ALNILQSTHMASQQITEEAVYLCTGNPLPIDIEQISYWLLNESFADGFKRISEMKTRKGL
ALVDIVREVTMFVFKIKMPSDVRVRLINDLADIEYRLSFGCNDKLQLGSLISTFTQARSA
LVAAAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgtttctcttatggatgtcgacgaagacgcgaaccaaaaccaaaaccaa
aacaacactctaaaatccaacaagggaaaagatgtcgtctccgccgcaccacctgacagc
aaagctactccttgggtcgagaagtaccgccctcagtcccttgctgacgtggccgctcat
cgagacattgtcgataccatcgacagattgactaccgagaaccggctgccacatctctta
ttatacggccctcctggtacgggcaaaacgtctactattctcgctgttgcacggaagctt
tacggagcgcagtaccataatatgattctggagctcaatgcatctgacgatagaggaatt
gatgttgtgaggcaacagatccaagattttgccagcacgcagagcttctcctttggagta
aaggcatcagtgaaattggtcttgcttgatgaggcagatgccatgacaaaagatgctcag
tttgccctgcgtagagtgattgagaaatacacaaagaacactaggttcacacttatttgt
aatcatgtcaacaagattattccagctctgcagtctaggtgtacgagattccggtttgct
cctcttgaaccaagtcatgtcactgagcgactcaaacatgttataaaggctgaagggctt
gatgtaactgagagtggcttagcagcacttgtacggctatgcaatggtgatatgaggaag
gccttgaacattttgcagtcaactcacatggcttctcagcaaattacagaagaagctgta
tacctatgcactggaaaccctttaccgattgacattgagcagatatcttattggcttctg
aatgaatcttttgcagatggtttcaagagaatatccgaaatgaagacaaggaaagggttg
gcgttggtagatattgtaagagaagtgacaatgtttgtttttaagattaagatgccatca
gatgtccgagttcggctgattaatgatttggccgacattgagtacagactgagttttgga
tgcaatgacaagctacagcttggatctctaatttctactttcacgcaggcaaggtctgct
cttgttgctgctgcaaagtag
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integrated database retrieval system
