Mangifera indica (mango): 123228689
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Entry
123228689 CDS
T07684
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
minc
Mangifera indica (mango)
Pathway
minc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123228689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123228689
03036 Chromosome and associated proteins [BR:
minc03036
]
123228689
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123228689
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123228689
PBAF complex
123228689
GBAF(ncBAF) complex
123228689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
Pou
Motif
Other DBs
NCBI-GeneID:
123228689
NCBI-ProteinID:
XP_044510097
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All DBs
Position
11:complement(1009168..1011922)
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AA seq
456 aa
AA seq
DB search
MAAKELPGPSTPVKPEIPPTSDADADVVHLPSYSRWFSWDSINECEVKFLPEFFDSRSPS
KNPRVYKYYRDSIIMKFRENPSRKITFTDVRRILVGDVGSIRRVFDFLETWGLINFWASV
KPLKWEDKETKSAASSVEFAALRKETSKRVCNGCKSLCTIACFACEKYELTLCARCYVRG
NYRVGVSSSDFRRVEISEETRTEWTEKETLLLLEGIMHYGDDWKKVAQHVPGRSERDCIS
HFIKLPFGEEFIGHPDLGEDDIKINHTKNPGNAESELLIDCTASPSKRMRLTPLADASNP
IMAQAAFLSALAGVEVAEAAARAAVTTQSEVDNRISELNLSSLVRNTKHQEAEVAANGNT
TENVLEKTSFDANSLIEKDQLDVEKAVTDIIEIEMKEIQDKIVRFEKLDLQMEKEWQQLE
ELKNMLFVDQLSLLFHKTTAPKTVDHAEENVKTHVP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagagcttcccggaccctccactcccgtgaagcccgagattcctccgacc
tccgacgccgacgccgacgtcgtacacctccccagctactccagatggttttcatgggac
tctatcaatgaatgcgaggtcaaatttcttcctgaatttttcgattcacgttccccttca
aaaaaccctagagtttacaagtactacagggattctataatcatgaaatttcgagaaaat
ccttctaggaaaatcactttcacagacgtcaggaggattctggtgggtgacgtgggctcc
attcgaagggtatttgattttcttgagacttggggactcatcaatttctgggcttctgtc
aagcccctcaagtgggaagataaagaaactaagtctgctgcttcttctgttgaatttgcc
gctttacgtaaggagacttctaagagggtttgcaatggctgcaaatctctttgtaccatt
gcttgttttgcttgtgaaaagtatgagttgacgctttgtgcaagatgctatgttcgtggg
aactatcgggttggtgttagttcttcagactttaggagggttgagatcagtgaggagaca
agaacagaatggacagagaaagagactttgcttcttctggagggtattatgcattatggt
gatgactggaagaaagttgcacagcatgttcctggtagatctgagagagactgcatctct
cattttatcaagcttccttttggggaggaatttatcggtcatccagacttaggggaagat
gatatcaaaattaatcatacgaagaatcctggcaatgctgaaagtgaattgttaatcgac
tgcacagcatcccctagtaaaagaatgcgtctcactcctcttgcagatgcaagcaacccg
atcatggctcaggctgcttttctgtcggctttggccggtgttgaggttgccgaagcagct
gctcgagcagctgttacaactcagtcagaggttgataacagaattagtgaactgaatctt
agctctcttgtcagaaacacaaaacatcaagaagctgaagttgcagctaatggcaatacc
actgaaaatgtgctggaaaagacgtcttttgatgcaaattccttgatagaaaaggaccag
ctggacgttgagaaagctgttactgatatcatagaaatagagatgaaagagatccaagat
aagattgttcgctttgaaaagttggatcttcagatggagaaagaatggcaacagttggag
gaactgaagaatatgctttttgttgatcaactttctcttttgttccataagactactgct
ccaaaaacggtagatcatgctgaggagaatgtcaaaactcatgttccttag
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