Mangifera indica (mango): 123228866
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Entry
123228866 CDS
T07684
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase isoform X1
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
minc03016
]
123228866
Enzymes [BR:
minc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
123228866
Transfer RNA biogenesis [BR:
minc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123228866
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
MetW
Ubie_methyltran
OYE-like_second_a-b
Methyltransf_9
Nup96
DUF7452
Motif
Other DBs
NCBI-GeneID:
123228866
NCBI-ProteinID:
XP_044510284
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Position
11:5349440..5352794
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AA seq
397 aa
AA seq
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MLQSHGFFVLLNASRCFYKFCKTCPRSFVNICCVCPPLISRTMREVKAKSAFGLCTAAAG
GESNIQDSVSVSKDRSCSSSSVISTPELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLN
SLPSGSLVLDAGCGNGKYLGLNPNCFFLGCDISPSLIKICADRGHEVLVADAVNLPYRTG
YGDAAISIAVLHHLSTEKRRKKAIEELVRVVKKGGLVLITVWAVEQEDKSLVTKWTPLSE
KYVEEWIGPGSPHIRSPSSPTLESIPETEENGMGECVKESKEKSTDKLWESLCLPSQSED
NLAVSKDEKAINNQQEYFVPWHLPYHRAEVSGASASALANGLAKKDDKKGAVVYNRYYHV
FSAGELERLTSDMNNAVVVDRFYDKSNWCIILEKTSA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaatctcatggttttttcgtgcttctgaatgcaagtagatgtttctataagttt
tgcaagacttgtcctcgatcctttgtcaatatttgttgtgtttgtcctccattaatttcc
agaaccatgagagaagtgaaagctaagagtgcctttggtctgtgtactgcagctgctggt
ggggagtcaaatattcaggattctgtttctgtaagcaaggaccggagttgctcatcctca
agtgtaatatccacccctgaattggagaagaagtatgtacatcgtgtttatgatgctatt
gccccccatttcagttccactcgttttgctaagtggccaaaagttgccacatttttgaac
tccttgccttctggttcacttgtcttggatgcaggatgtggaaatgggaagtacttgggt
ttaaatccaaattgcttctttctgggttgtgatataagtccttccctaataaaaatttgt
gcagatagagggcatgaggttttggttgcagatgctgtaaaccttccctacagaactggt
tatggtgatgcagcaatatctatagctgtattacatcacctaagtactgaaaagaggaga
aagaaagcaattgaagaattagttcgggttgtcaaaaagggtggtttagttctaataaca
gtctgggctgtggaacaagaggataaatctttagttaccaagtggacaccgctttccgaa
aagtatgtggaagagtggataggaccaggcagtcctcatatccggagcccttcatcccca
acattagaaagtattcctgaaacagaggaaaatggtatgggagaatgcgtaaaagaatcc
aaagagaaatctactgacaagttgtgggaatctctctgtttaccctctcaaagtgaagat
aatttggcggtttctaaagatgaaaaagccataaacaatcagcaagaatattttgtccct
tggcacttaccttatcaccgagctgaagtcagtggtgcttctgctagtgctcttgcaaat
ggcctggcaaagaaagatgataaaaagggtgctgtggtgtacaacagatattaccatgtc
ttcagtgcaggtgaacttgaaagattgacatctgatatgaacaatgcagtagtggttgat
cgattttatgacaaatcgaactggtgtattattcttgagaaaacgtcagcatga
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