Mangifera indica (mango): 123229011
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Entry
123229011 CDS
T07684
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123229011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123229011
Spliceosome [BR:
minc03041
]
Complex A
U1 snRNP components
U1 related factors
123229011
Complex B
123229011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
123229011
NCBI-ProteinID:
XP_044510497
LinkDB
All DBs
Position
11:complement(3647639..3658444)
Genome browser
AA seq
1011 aa
AA seq
DB search
MANNPQSSGAQFRPVLPTQQGQSFIPAASQQFRPVGQGISSSNIGMPSIPSQQVQFSQPM
QQFPPRPNQPVHALPSSQALQGSYVQTNRPLTAGTPQSQHPAPTMNNQMPGLGVPGMPLS
SSYTFVPSSYGQSQNNASGSSQFQPMPQMHAPGAPVAGQSWVASVNHSAPVQQTGQQTST
VSSTDTVTHVPSVTQASTCDWQEHTASDGRRYYYNKRTKQSSWEKPLELMTPIERADAST
VWKEFTTPEGKKYYYNKVTKQSKWSIPEELKLAREQAQVAASEVTQSELGVNSNGSAAAA
VAVSSAETPSAAISVSSSTSLALSAVASSPVPVTPVVAVTNLPPVIVSGSSHIPVAQSAE
AIATAIQPSIVTPLNVVGSGCTNVPPGSVNAKTSVTGGFGNFMPQDAVNSVDGASIQDIE
EAKKGMAVAGKVNVTPAEEKTPDDEPLVFANKLEAKNAFKALLESANVQSDWTWEQAMKE
IINDQRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAKEEFTKMLEESKELTSST
KWGKAVAMFENDERFKAVERVRDREDLFDNYMVELERKEKEKAAEDHRRNIAEYRKFLQS
CDFIKVNSQWRKVQDRLEDDERCSCLEKIDRLLIFQDYIRDLEKDEEEQKKLQKEQVRRT
ERKNRDAYRKMMDEHVAGGILTAKTQWRDYCLKVKDFPQYHAVASNTSGSTPKDLFEGVA
EELEKQYHEDKARIKDAMKSEKVAIATTWTFEDFKAAVSIDLGSPKISDINFKLVYKELL
DRAKEKEEKEAKKRLRLADDFTKLLYTYKEITASSNWEESKSLFEDSEEYKLIVEESFKR
QIFEEYISHLQEKAKEKERRREEEKAKKEKEREEKEKRKEKEKKEKDRERDREKWKERTN
KDETDSENVDPTDGYSHKEEKKKEKDKDRKHRKRHHSAADDVSSDRDEREDSKKSRRHGS
DRKKSRKHAYTPESDTESRHKRHKREHRDGSRRNSGYEELEDGELGEDSEI
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggccaataatcctcaatcctctggagcacagtttcgaccagttcttccaacacagcaa
ggtcaatcatttattccagcagcttcacaacagtttcggcccgttggacaaggtatttcc
tcttcaaatattgggatgccaagcatacctagtcagcaggtgcagttttcacaaccaatg
cagcagtttcctccaaggccgaatcagcctgttcatgcattgccttcatcacaagcttta
caaggatcatatgtccaaactaataggcctctgacagctggcacacctcagtcacagcac
ccagcccctacaatgaataatcagatgcctggtttaggtgtccctggaatgcctctctct
tcatcttatacttttgtgccatcttcttatggccaatcgcagaataatgcaagtggatca
tcccagttccaaccaatgcctcaaatgcatgcacctggcgcacctgtagctggtcaatca
tgggtggcgtctgtgaatcacagtgcgccagtacaacagactggtcaacaaacatcaact
gtttcttccacagatacagtaacacatgttcctagtgttactcaggcttctacctgtgat
tggcaagagcatactgcaagtgatggaagaagatattattataacaagaggactaaacaa
tctagctgggagaagcctttggaactgatgacaccaattgagagggcagacgcttcaact
gtttggaaagaattcacaactccagagggaaaaaagtattattacaacaaagttacaaag
cagtctaagtggtcaatacctgaggaactgaagctagccagggaacaggcccaggtggca
gctagcgaggtaacccaatcagaattgggagtgaattctaatggttctgctgctgctgct
gttgctgtttcctcagctgaaacacccagtgcagccatttcagttagctcaagtacttca
ttggccttatctgctgtggcttctagtccggttccagtaacacctgttgttgctgtgact
aatcttcctcccgtgatagtttctgggtcgtcacacattcctgttgcacagtctgctgaa
gcaattgccactgccattcaaccttcaatagtgactccattaaatgttgttggttcagga
tgtactaacgtgcctcctggttcggtcaatgccaaaacaagtgtaactggtggctttgga
aatttcatgccccaagatgctgtaaattctgtagatggagcttctattcaggatattgag
gaagcgaaaaaaggaatggcagttgctggaaaagtcaatgtgactcctgcagaggagaaa
acacccgatgatgaacctttagtttttgccaataagctggaggcaaaaaatgctttcaaa
gctcttcttgaatctgcaaatgtgcagtctgattggacttgggaacaggcaatgaaagag
ataattaatgaccaaagatatggagctctgaaaacacttggtgagcgtaagcaagcattt
aatgagtacttgggtcaaaggaagaagctggaggctgaggagaggcgaatgaggcagaaa
aaagctaaggaggaattcacaaagatgcttgaagagtccaaggagcttacatcttctaca
aaatggggcaaggctgtagccatgtttgagaatgatgaacggttcaaagctgttgaacga
gttagagaccgggaggatctttttgacaactacatggtggaacttgagaggaaggagaag
gaaaaggctgcagaggaccacagaaggaatatagcagagtacaggaaatttcttcaatcg
tgtgattttattaaggtgaacagccagtggcgaaaagttcaggatcgcttagaagatgat
gagagatgctcgtgtcttgaaaaaattgatcgcttgctgattttccaggactacattcgt
gatttggagaaggatgaagaggaacaaaagaagttacagaaggaacaagtgaggcgaact
gagcggaaaaaccgtgatgcatatcggaagatgatggatgaacatgttgctggaggcatt
cttacagccaaaactcagtggcgtgattattgtttaaaggttaaagattttccccaatat
catgctgttgcatcaaatacctctggctcaacccctaaagatctgtttgagggtgttgcc
gaagaattggagaagcagtatcatgaagacaaagctcgtataaaagatgcaatgaaatca
gagaaggttgccattgccacaacatggacgtttgaagactttaaggctgctgtttcaata
gatttgggttctccaaagatttcagatatcaactttaagcttgtttacaaggagttactt
gacagagcaaaggagaaggaggaaaaagaggctaaaaagcgcttgcgacttgctgatgac
tttactaaactattgtatacttacaaggaaataacggcatcttctaattgggaagaatcc
aaatcactttttgaagacagtgaagagtacaaattgattgtggaagagagctttaagaga
cagatctttgaggaatacatttctcacttgcaggaaaaggctaaagaaaaggaacgcagg
cgtgaagaagaaaaggctaaaaaggagaaagagagagaggagaaagagaaacgaaaggag
aaagagaaaaaagagaaggatagagaacgtgatagagaaaagtggaaggaacgaacaaac
aaagatgaaacagatagtgaaaacgtagatccaactgatggctacagccacaaagaggag
aagaaaaaggaaaaagacaaagataggaaacatcggaaacggcatcatagtgctgctgat
gatgtgagctcggatagggatgaaagagaagattctaaaaagtctcgcagacatggtagt
gaccgtaaaaaatctagaaagcatgcttatacacctgagtcagacactgaaagccggcat
aaaagacacaaaagagagcatcgggatggttctcgtagaaatagtggttatgaggagctt
gaggatggggagcttggtgaagacagtgagatctag
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