Mangifera indica (mango): 123229320
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Entry
123229320 CDS
T07684
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123229320
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
123229320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_Vigilin
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
123229320
NCBI-ProteinID:
XP_044510998
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Position
11:3856742..3861360
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AA seq
685 aa
AA seq
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MSVPLTPAKRSSDRSHTESNGKGKWQKLAGNYSQDQSSKSSDSDATIRVLCPVSKIDGII
GKDGETISQISQEAGVMIRVEEIVPGCDERVVVIAGSYKESEASTEHSKEGGVEETNATE
KEDTNLKDSENDADKESVPLADSKSESQTSDLQKALLLVFEKIAAEPETDGGDEENKNSS
IFILRLLVLSNQVGCLLGKGGSVIKLMSADSGAQIRVLPRDKLPTCASASDEVVQVSGEI
DAVRKALQSVSQQLLKNPPRDHDSFPANLTGQSHPPNHSFGSQGATHALGRRDGTDVHSS
NTPLIPKFHESSMPSRLKPLQELLTFRILCHDERVGGVIGKGGSIIKSLQQETGCEIKVL
EAVSNTDDRIIVVAGPAHPDDRISPPQDAVLRVQTRIIRAIPDSREQVMARLLVSSNQIG
CLLGKGGAIISEMRKLTGAYIRILGKDQIPKCASESEEVVQINGEFEAVQEALLQITTRL
RNHFFRDAFPSMNHPLNPTFLDHVPPFPSYVGRREHSPPGMYSNLGPSFPKFDVGGPPRH
AGFHPHDDRSLFMHEARRPGLAPHIPERKPWGAQGFIEGGGSIGLPDFAGPPHRRILGFG
GGSQPAIITNTTVEVVVPRSLVPIIEGEDGACLKQIRQISDAKITITEPKPGATETVIII
SGTPEQTHAAQSLIQAFVMSETEST
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcctttaactcctgctaaacgatcatctgatcgcagccatacagagtcaaat
gggaaagggaaatggcaaaaattggctggcaattattcgcaggatcagtcttcgaaatcc
tccgatagtgatgctacaatccgcgttctctgtccagtttcaaaaattgatggcattatt
ggaaaagatggtgaaacgatatcacaaattagtcaggaagctggtgtaatgatcagagtt
gaggagattgttcctggttgtgacgagagagtggttgtcattgctggctcttataaagag
tcagaagccagtactgagcacagcaaggagggtggtgttgaggagaccaatgcaacagaa
aaggaagacactaacctgaaagatagtgaaaatgatgcagacaaggaatcagttcctttg
gctgattctaagtctgaaagccaaacttcagatttgcagaaggctttgttacttgttttt
gaaaaaattgcagcagaacctgagacagatggaggtgatgaggaaaataaaaattcttca
atattcattttgagattacttgtgctttctaatcaagttggctgccttttggggaaagga
ggcagtgtaatcaaactaatgtctgctgacagtggggcacagattcgggttcttccaaga
gacaagcttcctacttgtgcatcagcttctgatgaagtagttcaggtctcaggagagatt
gatgctgttaggaaagctcttcagtctgtttctcaacaacttttaaagaatccacctcgg
gatcatgattctttccctgccaatctgactgggcaatcacatccccctaaccattctttc
ggttctcaaggagcaactcatgctcttgggcgacgggatggtactgacgttcattcatct
aataccccgttgattcctaaatttcatgagagcagcatgcctagccgactgaagcctttg
caggaacttctaacattccgcattttatgccatgatgagagagtaggaggtgtcattgga
aagggaggatcaataataaagtctcttcagcaagagactggatgtgagattaaagttctg
gaagctgtttctaatacagatgaccgcatcattgttgtagctggtccagctcacccagat
gataggatttcacctccacaagatgcagttcttcgtgtgcagaccaggataattagggca
attcctgatagcagggagcaggttatggcaaggcttcttgtatcctctaatcaaattggc
tgtcttcttggtaaaggtggtgctatcatatcagagatgagaaagttaactggggcttat
attcgcatattagggaaggatcagattcctaagtgtgcttctgaaagtgaagaagttgtt
cagattaatggagaatttgaagcagttcaagaggctcttttgcagataacaactagattg
cgtaatcattttttccgtgatgcatttccttcaatgaaccatcctctaaatcctaccttt
ctggatcatgtacctccatttccttcatatgtaggaaggagggaacactcacctccagga
atgtattctaatttaggcccatcatttcccaagtttgatgttggcggcccacctcgacat
gctggttttcatccccatgatgatcgttctctttttatgcatgaagctcgtagaccaggc
ttggcccctcatatacctgaaaggaaaccatggggtgctcagggatttattgaaggtggt
ggctcaatcggtttgccagattttgctggacctcctcacagaaggattttgggttttgga
ggaggaagccaacctgctattataacaaacactactgttgaagttgttgtccctcgttct
cttgttcctataattgaaggagaagatggtgcatgtttgaaacaaattcgtcagatctct
gatgcgaaaatcactattactgagcccaagcctggagcaactgaaactgtgatcattata
tctgggacacctgaacaaactcatgccgcacagagtcttattcaggcatttgtaatgagt
gagacagaatctacttga
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