KEGG   Mangifera indica (mango): 123229704
Entry
123229704         CDS       T07684                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
minc  Mangifera indica (mango)
Pathway
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123229704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123229704
   03041 Spliceosome [BR:minc03041]
    123229704
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123229704
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123229704
Spliceosome [BR:minc03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    123229704
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 PNISR
Other DBs
NCBI-GeneID: 123229704
NCBI-ProteinID: XP_044511553
LinkDB
Position
11:7839341..7840630
AA seq 429 aa
MAKKRKLQEEEPKHQPKALKSSASSSSDEESESEESDEVEELKRPSSQSSSEEEESSEEE
EDEDDDEDHEEEQDDEQSKLGKVKKLLEPFSKDQLIAILKEAAQSDPSVTAEIISLAESD
PVHRKIFVHGLGWDATNETLIAALKPFGAIEECNVVTDKTTGRSKGYGFVLFKTRAAARK
ALKEPQKKIGNRIAACQLASTGPVQNQPGSEMSSRKLYVANVGPQIGAEKLRAFFAKYGE
IEDGPLGFDKMTGKFRGFAIIVYKTFEGIKKALEEPVKIFDGFKLLCSVAVEGRSTKNNN
NNNASAGPASVAAGVNAAIMPALALGFNPGAVLLGQNPAAMGVLNPVLGGAFAGGITQSL
NSPMGLNPGFGVQQGVTALNPSMIGGYGSQATFQGLGAYQNSQLGQPSAPATATAAARPQ
TGTAPFVSR
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggcaaaaaagcgaaagctgcaagaagaagagccgaagcatcaacccaaagccctcaaa
tcatccgcttcctcatcttccgacgaagaatcggagtcagaagaatctgatgaagttgaa
gaactgaaacgaccatcatctcagtcatcttcagaggaagaagaatcatcagaagaagaa
gaagatgaggatgacgacgaagaccacgaagaagaacaagatgatgagcaatccaagctg
ggaaaggttaagaaactgttagaaccctttagcaaggaccagcttatcgcgattctcaaa
gaagccgctcaatctgacccttcagttaccgccgaaatcatctccttggccgagtcggac
cccgtccaccgcaagatcttcgtccacggccttgggtgggatgccactaatgaaacccta
atcgctgctctcaaaccttttggcgccatcgaggaatgcaatgtcgtcaccgataaaact
accggccgttctaaaggctacggctttgtcctcttcaagacgcgcgccgctgcgcgaaag
gcattgaaggagccgcagaagaagatcggaaatcggatcgccgcctgccagttagcttcc
actggacctgttcagaaccagccgggttctgagatgagttctcggaaattgtatgtggcg
aatgtggggccgcagattggtgccgagaagctcagggcgtttttcgcgaaatatggggag
attgaggatgggccgttggggtttgataaaatgaccgggaagtttagaggttttgctata
attgtgtataagacattcgagggaataaagaaggctttggaggaacctgtgaaaattttt
gatggtttcaagttgctgtgctctgttgctgttgaaggccgcagtactaagaataataat
aataataatgcttcagcaggtccagcttctgtggctgcaggtgttaatgctgcaataatg
ccggctttagctttagggttcaatcccggtgctgttttgttggggcagaatccggctgcc
atgggggttttgaacccggttttgggtggtgcattcgctggtgggattacgcagtccttg
aattcaccaatgggattgaatccagggtttggtgtgcaacagggtgttactgctttgaat
ccaagtatgattggtggttatggttctcaggctactttccagggtctgggagcttatcag
aattcccaactgggtcagccttcggcgcctgcaactgcaacggctgcagctaggcctcaa
actggaactgcacctttcgtctctaggtaa

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