Mangifera indica (mango): 123229799
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Entry
123229799 CDS
T07684
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123229799
Spliceosome [BR:
minc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123229799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
TGF_beta
UNC45-central
Motif
Other DBs
NCBI-GeneID:
123229799
NCBI-ProteinID:
XP_044511700
LinkDB
All DBs
Position
11:7638260..7646032
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AA seq
446 aa
AA seq
DB search
MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAMAALQY
YTNVQPSIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FTTHGFVEKIVTFQKSAGFQALIQYQLRQSAVVARTSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGRSSQSGYGDAGGMYAPGARAVPFPQMANAAAIAAAFG
GSLPPGISGTNERCTILVSNLNSDRIDEDKLFNMFSLYGNIIRIKLLRNKPDHALVQMAD
GFQAELAVHFLKGAILFGKRLEVNFSKHQNITQGADTHEYINSNLNRFNRNAAKNYRYCC
SPTKMIHLSTLPQDVTEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFETEEQATEALVC
KHASSLGGSIIRISFSQLQSIRENSQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccttccaaagttattcacgttcgcaatgtgggccatgagatttctgaaaat
gatttacttcagctattccagccatttggagtcataactaagcttgtgatgcttcgtgca
aaaaatcaggctctcctccaaatgcaagatgttccttcagccatggctgctctccagtac
tacacaaatgtccaaccatcaataaggggaaggaatgtttatgttcagttctcatcgcat
caggagttaacaacgatggatcaaaatactcagggacgaggggatgagccgaaccgaatc
ctcttagttacaattcatcacatgctttatcctattactgtggaagtgctgcatcaagtt
tttactactcatggatttgtggagaagatcgtcacattccagaagtcagctggttttcaa
gctctaatccagtatcaattacgccaaagtgctgtagtagctagaacttctcttcagggt
cgcaatatttatgatggttgctgtcagctagacattcagttctcaaaccttgatgagcta
caagtgaactacaataatgagcggtcaagggacttcacaaatccaaatcttccttcagaa
cagaaaggcagatcctcacaatctgggtatggtgatgcaggaggtatgtatgcccctgga
gccagggcagttccatttccgcagatggccaatgcagctgcaattgcagctgcctttggg
ggaagtttacctcctggaatttcagggacaaatgagaggtgtacaatcttagtgtccaac
ctaaattctgataggatagatgaggataagcttttcaacatgttctccctctatggaaac
atcataagaattaaacttctccgtaataaaccagatcatgcacttgttcagatggctgac
ggcttccaggctgaattggcagtgcactttctgaagggagccatactgtttggaaagcga
ttggaggtcaatttctctaagcatcaaaacataacacagggtgctgatacacatgagtac
ataaactcaaatctcaaccgctttaaccgtaatgctgcgaagaactaccgttattgctgc
tcaccgacaaagatgatccacctttccactctgccacaagatgtcactgaagaggagatt
gtgagccacctagaggagcatggcaccattgtgaataccaagctcttcgagatgaacgga
aagaagcaggctcttgttatgtttgaaaccgaggagcaggccactgaagcccttgtgtgc
aagcatgctagctctcttggtgggtctataatccgaatttccttctcccagttacagtcg
ataagagaaaactcacagtaa
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