Mangifera indica (mango): 123229868
Help
Entry
123229868 CDS
T07684
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123229868
Enzymes [BR:
minc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123229868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
123229868
NCBI-ProteinID:
XP_044511798
LinkDB
All DBs
Position
11:4104693..4110905
Genome browser
AA seq
672 aa
AA seq
DB search
MRRILQRFPRCSCCGFAMCSNFVSEGTDSGKQVLQNNTCPTMAPVRLHIQDRYVVLDNGI
LQVTLSKPGGIVTGIRYNGIDNLLEFRNKETNRGYWDLNWSPPGGKGMFDVIEGTNFRVI
VEKEEQVELSFSRLWNSSLEGKYIPLNIDKRFIMLRGSSGFYSYAIYEHLQEWPAFSLDQ
TRFTFKLRKEMFRYMAIADNRQRHMPLPEDRMTGKGQPLAYPEAVLLVNATDPELQGEVD
DKYQYSCESKDLRVHGWICYAPPVGFWVITPSYEFRSGGPMKQELSSHVGPTSLVVFLSG
HYAGKYMVTNFGPNEPWKKVFGPVFIYLNSAVNGDDPRWLWEDAKIKTMDEIQSWPYSFP
ASEDFQKSEQRGSVCGRLLVLDRYVSKDCIPANSAYVGLAPPGDVGSWQTECKDYQFWTK
SDEEGYFSIPHVRTGNYNLYAWVPGFIGDFRHDAVVTITSGCNIELGDLVYEPPRDGPTL
WEIGIPDRSAAEFYIPDPHPMYLNKLYVNHPERFRQYGLWSRYAELYPDEDLIYTIGVSD
YRKDWLFAHVVRETGDTRQGTTWQIKFKLDKLDQSGNYKLRVAIASATLAELQVRVNDPN
TNRPLFTTGLIGRDNAIARHGSHGLYWLYHVNIPATKLLEGENTIFLKQPRCQSPFQGFM
YDYIRLEGPPSS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggattttgcagagattccctcgttgttcctgttgtggctttgccatgtgtagc
aattttgtgagtgaaggaactgacagtggcaaacaagttctgcaaaataacacatgcccc
accatggctcctgtccggttgcatattcaagatcgttatgtggtgttggataatggtata
ctccaagtcacattatcaaaaccgggtgggattgttactggaatacgatataatggcatt
gacaatttgcttgaatttcgtaacaaggagactaatagaggttactgggatcttaattgg
agtccaccagggggaaagggaatgttcgatgtgatcgaaggaacaaattttagggtcatt
gttgaaaaagaggaacaagttgaactctcattctcaaggttgtggaattcctctcttgag
ggaaagtacattcccttaaacatagataaaaggttcattatgcttcgtggttcatcgggg
ttttactcttatgcaatttatgagcacttacaggaatggcctgcattttctcttgatcag
acccgattcactttcaagctcagaaaagagatgtttcgctatatggcaatagcagataac
agacaaagacatatgccccttcctgaggatcgaatgactggaaaaggtcaacccctcgct
tatccagaagctgtcctccttgttaatgccacagatcctgagctccaaggggaggtggat
gacaagtatcaatattcatgtgaaagtaaagatcttagggttcatggatggatatgctat
gctcccccagtagggttctgggtaattacacctagttatgagttccgatctggtggacca
atgaaacaggaactttcatcacatgtaggccccacctcccttgttgtgtttcttagcggt
cactatgccggaaaatatatggtgacaaattttggacctaatgaaccatggaagaaagtc
tttggtccagtttttatctatctcaattctgctgttaatggagatgacccacgttggctt
tgggaggatgcaaaaataaagacgatggatgaaatccaaagctggccatacagttttcct
gcatctgaggattttcagaagtcagaacaacgaggaagtgtttgtggtagactactagtg
ttagacagatatgtaagcaaagactgtattccggcaaatagtgcttatgttgggctggca
ccacctggagatgtaggctcatggcaaacagaatgcaaggactaccaattctggaccaaa
tcagatgaggagggctatttctccataccacatgtacgtactggcaactataatctttat
gcctgggtccctggtttcattggagattttcgacatgatgctgttgttaccataacctca
ggttgtaatattgaattgggcgatctggtatatgagcctccaagagatgggccgacattg
tgggaaataggcatccctgatcgttctgctgcggagttctatattcctgaccctcatcct
atgtatcttaataaactatatgtcaatcatcctgaaagattcaggcagtatggtttatgg
agtagatacgcagaattgtatcctgatgaggacttgatatacacaattggtgtcagtgac
tatcgcaaggattggctctttgctcacgttgtcagggagacaggtgatacacgtcaagga
accacttggcaaattaaattcaaacttgacaagctggatcagagcggtaactacaaattg
cgagtggcaattgcatcagcaaccctagctgagttgcaggtccgagttaatgatccaaac
acaaatcgtcctctgtttacaaccggactgatcgggagggacaatgcaattgcaagacat
ggaagtcatgggctttattggctgtaccatgtaaacataccggctactaagcttcttgaa
ggggagaataccatcttccttaaacaaccaagatgccaaagccctttccaagggtttatg
tatgattatattcgtttagaaggtccccccagctcctaa
DBGET
integrated database retrieval system
