Mangifera indica (mango): 123229961
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Entry
123229961 CDS
T07684
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
minc
Mangifera indica (mango)
Pathway
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123229961
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Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
123229961
NCBI-ProteinID:
XP_044511954
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Position
11:complement(4855887..4861097)
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AA seq
683 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGPFFPGRVSRWWLKHSL
AHLDSSLRSLGTCLITKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKELLT
AQGIAVRSFNADLLYEPWEVNDAQGHPFTTFAAFWERCLSMPYDPDSPLLPPKRIISGDI
RRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKTGDESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLKFFPWVVDEGHFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVSIDAATARLQEA
LTEMWQQEAASRAAIENGTEEGLGDSSEAAIIAFPGDIQMEENHEPARNNPPTTARCYED
QMVPSITSSLVRVEEEESSLDLQNSVEDSRAEVPRNVNVNVNQEPRRDTLNQGVPHTVHD
NNPLRQFNIAVGMRNAEDSTAESSSTSRRERDGGVVPVWAPPSSSFSEQLVGDENGIGTG
SSYLQRHPQSHQIMNWRRLSQTG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgggtgtagtatagtttggttcaggagagatctaagagtagaagataat
ccagcactggcagctggtgtgagagctggtgctgttgttgcagtttttatttgggctcca
gaagaagagggtcctttttttccggggagggtgtctagatggtggctcaagcacagtttg
gctcatctggattcttctttgaggagtcttggtacttgtctcatcaccaaaagatccact
gacagtgtttcttctcttcttgaggttgttaaagcaactggtgctactcagctcttcttc
aaccatttatatgaccccttgtctctggtaagggatcaccgtgcaaaggagcttttaact
gcacaaggcatagctgtgcgttcgtttaatgcggatctgctctatgaaccctgggaggta
aatgatgcacaaggccaccctttcacgacatttgctgcattttgggagagatgccttagc
atgccttatgaccctgattctccacttctcccacctaagaggataatttcaggtgatata
cgtagatgcccttcagatacattagtgtttgaagatgaattggagaaagggagcaatgca
cttcttgcaagagcatggtcgcccggctggagcaatgctgataaagctctcaccacattt
attaatgggcctttaattgagtactctaagaatcggagaaaggctgatagtgccacaacc
tcatttctttcaccgcacctgcattttggggaggtaagtgtgagaaaagtcttccatctt
gtccgcatcaagcaggtttcctgggccaatgaagggaacaagactggtgatgagagtgtg
aatttgtttctcaagtcaattggtcttcgagaatattcaagatatatgagttttaaccat
ccttacagtcatgaaaggcctcttcttgggcaccttaaattctttccttgggttgttgat
gaaggccattttaaggtatggagacaaggtagaactggctatccactggtggatgctggc
atgagagagttgtgggccactggctggcttcatgatcggatacgtgttgtagtttctagt
ttctttgttaaggttcttcagcttccttggagatggggaatgaagtatttctgggatacc
cttttggatgcagatttagagagtgatgctcttggttggcagtacatatctggcactctt
cctgatggtcgtgaatttgaccggatagataatccacagtttgagggttacaagtttgac
cccaatggagaatatgtacgaaggtggcttcctgaacttgctcgactgccaactgaatgg
atacaccacccgtggaatgcaccggagtctgtactccaagctgctggcattgagcttgga
tccaattatcctctacccattgtgagtatagatgcagcaacagccaggttacaagaagca
cttactgaaatgtggcagcaggaagcagcttcaagagctgcaattgagaatggaaccgag
gaaggtcttggagactcatctgaagcggccataattgcctttcctggagacatacaaatg
gaggaaaaccatgaacctgctaggaataatcctcctaccacagctcgttgttacgaggat
cagatggtcccaagcataacttcttctttggtgagagttgaagaggaagagtcttccttg
gatcttcaaaattctgtagaagatagcagagcagaagttccaagaaatgtgaatgtaaat
gtaaatcaagaacctagaagagacacattaaatcaaggggttccacatacagttcatgac
aataaccctttgcgacaatttaatattgcagtaggtatgcgaaatgctgaagactccacg
gctgaatcttctagtaccagtagaagagagagggatggaggggtggttcctgtttgggct
cctccatcttctagtttctcggagcagttagttggtgatgaaaatggcattggaacaggt
tcatcatacttgcagaggcatccacagtctcaccaaataatgaattggaggcggctttct
caaactgggtaa
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