Mangifera indica (mango): 123229980
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Entry
123229980 CDS
T07684
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123229980
04121 Ubiquitin system [BR:
minc04121
]
123229980
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123229980
Membrane trafficking [BR:
minc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123229980
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123229980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
Zn_ribbon_SprT
DUF7560
zf-C3HC4_3
Prok-RING_1
zf-Nse
DUF7685
Motif
Other DBs
NCBI-GeneID:
123229980
NCBI-ProteinID:
XP_044511986
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All DBs
Position
11:5708939..5710594
Genome browser
AA seq
338 aa
AA seq
DB search
MSLSPPRERTQGANEPINNNDNNGIANRNFQLYWCYRCHTAVRISSSANPSEIICPRCFG
QFVQELEVTRPRLFVDFTAFDPSPEARLLEALSIILDPPIRLFNRTPSETQDPSRRRPWF
RRPRNNINIEPEPSTPRPRTWIVLRPVGPSNPIEPIMRPPNLGPPGVNPRDYFFGPELNQ
LIEELTQNDRPGPPPVPDAAIDAIPTVKITETHLKNEPNCPVCKEEFKVDGDARELPCKH
IYHSECIVPWLRLHNSCPVCRNEVPIASDSNIDTSGQDDECSEDHEEEGRRRRCWRLRQL
ACLWPFRARYGRIHPRPDIAGNSQGQEVGTSSCHCNIL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgagccctcctagagagagaacccaaggtgccaatgaacccatcaacaacaac
gacaacaatggcattgccaacagaaacttccagctctactggtgctaccgatgccataca
gctgtcaggatttcatcttccgcaaacccttcagaaatcatctgccctcgatgcttcggc
caatttgttcaagagcttgaagtcactagaccgaggctttttgtcgatttcactgctttt
gatccttctccagaagcccgtttacttgaagctctctccatcatactcgaccctcccatc
aggctgttcaatcgcactccttctgaaacccaagacccctctcgccgccgtccttggttc
cgtcgcccaagaaacaacattaacattgaaccggaaccttctacgcctcggcctcggact
tggattgtgcttcgaccagtgggaccttcgaatcctattgaaccaatcatgcgtccgcca
aaccttggccctcctggggttaatccgagggactactttttcgggccagagctgaaccaa
ctaatagaagagttgacacaaaatgatcgtccgggtccacctccggtaccggatgctgcc
atcgatgcaataccaacggtgaaaataacggaaactcatttgaagaatgagccaaactgt
ccggtttgtaaagaggagttcaaggtagatggagatgcaagagaattgccttgtaaacat
atataccatagtgaatgcattgttccttggttaaggttgcataattcttgccctgtgtgt
cgaaatgaagtgcccattgcttctgattctaatattgatacgagtggacaggatgatgag
tgtagcgaggatcatgaagaagagggtcgaagaagaaggtgttggaggttgaggcaattg
gcttgcctgtggcctttcagagcaaggtatggaagaatacatccgcggcctgatattgct
ggcaactcccaaggacaagaggttggcacaagttcatgtcattgcaatattctatag
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integrated database retrieval system
