KEGG   Mangifera indica (mango): 123230167
Entry
123230167         CDS       T07684                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:minc03009]
    123230167
Ribosome biogenesis [BR:minc03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    123230167
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I NBCH_WD40 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_LRRK2 Beta-prop_WDR75_2nd WD_LRWD1 WDR54 Beta-prop_WDR19_1st Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_DCAF12 VPS8_N MRJP
Other DBs
NCBI-GeneID: 123230167
NCBI-ProteinID: XP_044512249
LinkDB
Position
11:complement(2990793..2995928)
AA seq 447 aa
MELVIASSSIDDAGIGCWDLQSGAEQLRYNSCASPLHGLACIGGRFLASSQLRQPSSSSG
SVHYWSWSKPQAEVKSFPAEPIKPIAANSEGTYIVGGGQSGDIYLWEVMSGRLLKKWHAH
YRAVTCLVFSEDESLLISGSEDGCVRVWSLLMIFDDYESQQASHLYLHSFSEHTLRVTDV
VSGSGGCNAIIVSASEDRTCKVWSLSTGRLLRSIVFPSIIDAIRLDPAEHVFYAGSRDGS
IYIAALNAESSSSSSYGMHIISSLSDRSKAVTCLAYSTEGNLLLSGSEDGMVRVWDPRTR
NIVRMFKHAKGPVNNILVVRRPLYLSLGTFSSANASLRKHGSLLPPPLDKYINLTDEGLN
NKTVICLPTACDIPRDALYHSSQIIDKHIEEFQRQGSSAAAEMEVERLKHECGRSMQMVQ
QWKKMYDNLHEFCINELLDVDQVGGTK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggagctagtaatcgcatcatcatcgattgacgacgcaggcataggctgttgggatttg
caatcaggtgctgagcagctccgttacaactcatgtgcctcacctctacatggactcgct
tgtatcggaggccgtttcctcgcctcctcgcagctccgtcagccctcatcttcttcaggc
tccgtccactactggtcatggtccaagcctcaggcagaggtgaagagctttccagctgag
cctattaagccgattgcggctaatagtgaaggcacatacatcgttggtggaggtcaatct
ggagatatatatctatgggaggttatgagtggtaggttattaaagaagtggcatgcacat
tacagggcggttacatgcttggttttctcagaggatgagtcccttctgatttctgggtct
gaggatggatgtgttagagtttggtctcttttaatgatatttgatgattatgaaagtcaa
caggcaagccatctctatctgcatagttttagcgagcacactttgcgtgttactgatgtt
gtttctggttctgggggatgcaatgcaattatagtgtcagcttctgaggaccgaacgtgc
aaggtctggagcttatctacaggaagattattgagaagtattgtattcccctcgataatt
gatgcaattagattggaccctgctgaacatgtcttttatgctggcagtagagatggcagt
atttatattgctgcacttaatgctgaaagttcctctagcagcagttatgggatgcatatc
attagttcattgtctgaccgcagtaaggctgtgacttgtttggcatacagtacagaagga
aatttgttgctttctggttcagaggacggcatggttcgagtttgggatccaaggacccgt
aacattgttcgcatgttcaaacatgcaaaaggtcccgtgaacaatattcttgttgttaga
cgacctctctatcttagtttgggaacattctcaagcgcaaatgcttcgttaagaaagcat
gggtcactattaccgcctccgttggataaatatatcaatctgactgatgaaggcttgaac
aataagactgtcatctgtctccccactgcttgcgatattcctcgagatgctttgtaccac
agttctcaaataattgataagcatattgaggaattccagagacaaggttcttctgctgca
gcagaaatggaggtggagaggctaaagcatgaatgtggaaggtccatgcaaatggtccag
cagtggaagaaaatgtatgacaacttgcatgaattctgcattaatgaacttttggatgta
gatcaagtgggaggcaccaaatga

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