Mangifera indica (mango): 123230310
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Entry
123230310 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123230310
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123230310
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
123230310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4
Rtf2
zf-C3HC4_3
zf-C3HC4_2
Prok-RING_4
Pellino_RING
Motif
Other DBs
NCBI-GeneID:
123230310
NCBI-ProteinID:
XP_044512415
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All DBs
Position
1:complement(19374143..19380182)
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AA seq
382 aa
AA seq
DB search
MELNNIKDAFDRVAKKQKLSCSKTQEVIEKLIQEIGKELETIKTSSQLDDRHVLTELKKX
LQELAPLSQLEGTQKELNIALSKYVKVLEKSLNPDISKAYRNVEFDSETVDHIIANHFYR
XGFFDVGDCFISESKESENAAAMKSTFQELYEILEAMRSRSLEPALKWAAANSDKLKENG
SDLQLKLHSLQFVEILRGGSRDEALKYARAFLAPFASNRVSVIQKLMVCLIWARKLDSCP
YPQLLSPSNWFIVAEELTRQFCNLVGQSYDSPLSVTIGAGVQALPPLLKFMSVMAGKRQE
WQSMKQLPVPVELDKEFQFHSIFVCPVSKEQSTEDNPPMMMSCGHVLCRRSINKMSKNNS
RPFKCPYCPSEIEPQLCMQLYL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaataacattaaggatgcatttgatcgcgttgcaaagaaacaaaagctgtcc
tgttctaaaacccaagaagtgattgaaaagcttatccaagaaataggaaaggaattagag
acaataaagacatcctcacaactagatgatcggcatgtcctcactgagctaaagaaanaa
ttgcaagaacttgctcccctcagtcaactggaaggcacacagaaggaactgaacatagca
ctgagcaagtacgtgaaagttttggagaaatccttgaatccagatatatccaaggcttac
aggaatgttgaatttgatagtgagacagttgaccatataattgcaaaccatttctatcga
ncaggtttttttgacgtgggtgactgcttcataagtgagtccaaggaatcggaaaatgct
gctgctatgaaatccactttccaggaattgtatgagatccttgaagcaatgaggagtcgg
agccttgagccagcactaaaatgggctgctgcaaattctgataagctgaaagagaatgga
tcagaccttcagcttaaacttcacagcttgcagtttgtggaaatattacgaggtggaagc
agagatgaagctctcaagtatgctagagcctttctggctccttttgcttcaaaccgtgtg
agtgtgatccagaagctgatggtctgcctcatctgggctagaaagctggacagttgccca
tacccacaattgttatctccaagcaattggttcatagtggcagaggagctaactaggcaa
ttctgcaatcttgttggacaatcgtacgatagcccattgagtgtgacaataggcgcaggg
gttcaagctttgccaccacttctgaagtttatgagtgtgatggcagggaagaggcaagaa
tggcaatcaatgaagcagttgcctgtaccagtggaattggataaggagtttcagttccat
tccatatttgtatgtccggtgtcaaaggagcaatcaacagaagataacccaccaatgatg
atgtcttgcgggcacgtgctttgcaggcggtctattaacaagatgtcaaagaacaactca
agaccgtttaagtgcccgtattgcccatcagagatcgaacctcaactgtgtatgcagttg
tatctctaa
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