Methylobacterium indicum: mvi_04810
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Entry
mvi_04810 CDS
T07581
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mind
Methylobacterium indicum
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mind03016
]
mvi_04810 (truB)
Enzymes [BR:
mind01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
mvi_04810 (truB)
Transfer RNA biogenesis [BR:
mind03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
mvi_04810 (truB)
Prokaryotic type
mvi_04810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BCM82020
UniProt:
A0A8H8WPM7
LinkDB
All DBs
Position
511114..512001
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AA seq
295 aa
AA seq
DB search
MILDKGVGMTSTHAVAAVKRALNAKKAGHAGTLDPLASGILPIALGEATKTVPFVMDGRK
AYVFSVTWGVETDTDDAEGRPVATSDDRPTQEQVEAMLPRFVGAIEQVPPRYSAIKIQGE
RAYDLARDGEVVELVARPVQIDRLAIVAHTPERTVIEAECGKGTYVRAIARDLGRALGCY
GHVSALRRTRVGPFTEDQSCTVSALEAADAEANAAILRPVETALIEAVPHVPVSRDMAMR
LMRGQPVILRGRDAPTEGKAYATCGGVLVAVGDVERGELVPHRVFHLGGTAPRTA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgatcctcgacaagggcgtcggcatgacctcgacccacgcggtcgcggcggtcaagcgc
gcgctcaacgccaagaaggcggggcatgccggcaccctcgacccgctcgcctccggcatc
ctgccgatcgcgctcggcgaggccaccaaaaccgtgccgttcgtgatggacggccgcaag
gcctacgtcttctcggtcacctggggcgtcgagaccgacaccgacgacgcggaagggcgc
ccggtcgcgacctccgacgaccggccgacccaggagcaggtcgaggcgatgctgccgcgc
ttcgtcggcgcgatcgagcaggtgccgccgcgctactcggcgatcaagatccagggcgag
cgcgcctacgacctcgcccgcgacggcgaggtggtggagctcgtcgcccgcccggtgcag
atcgaccggctggcgatcgtggcccacacccccgagcgcaccgtgatcgaggccgagtgc
ggcaagggcacctatgtccgcgccatcgcccgcgatctcggccgcgcgctcggttgctac
ggtcacgtctcggccctgcgccgcacccgcgtcggcccgttcaccgaggaccagtcctgc
accgtctcggccctcgaggccgccgatgccgaggccaacgcggcgatcctgcgcccggtc
gagacggcactgatcgaggccgtgccgcacgtcccggtttcccgcgacatggcgatgcgc
ctgatgcgaggccagccggtgatcctgcgcggccgcgacgccccgaccgagggcaaggcc
tacgcgacctgcggcggcgtgctggtggcggtcggcgacgtcgagcgcggcgagctcgtc
ccgcaccgggtcttccacctcggcggcaccgcgccccggaccgcctga
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