Methylobacterium indicum: mvi_12550
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Entry
mvi_12550 CDS
T07581
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mind
Methylobacterium indicum
Pathway
mind03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
mvi_12550 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mind03400
]
mvi_12550 (alkA)
Enzymes [BR:
mind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
mvi_12550 (alkA)
DNA repair and recombination proteins [BR:
mind03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
mvi_12550 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
SAM_TNK
Motif
Other DBs
NCBI-ProteinID:
BCM82794
UniProt:
A0A8H8WR56
LinkDB
All DBs
Position
1380810..1381511
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AA seq
233 aa
AA seq
DB search
MRTTRTFPAISPNAAGVTGPLLDSEAVLREGVAALAALDPVMARLAAEGAAPVLRKRPPG
FAGLAGIVVGQQISTASAAAIWGRLTARLPDLTPEALAAAPDDPLREAGLSAPKIRTLRA
AAAAILDGTLPLDTLHALPADEAHRLMVAVHGIGPWTADVYLLFCLGHPDAFPAGDLALQ
EAARLADGLETRPSAAALTRRADAWRPWRGVAAKVLWASYRVAKARDGAPLSP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgacgaggactttccccgccataagcccgaacgccgccggcgtcaccgggccg
ctcctcgattccgaggcggtgctgcgcgagggcgtggcggcgctcgccgccctcgacccg
gtgatggcgcggctcgccgcggagggcgcggcaccggtcctgcgcaagcgcccgccgggc
tttgcgggcctggccggcatcgtggtgggccagcagatctcgaccgcgagcgcagcggcg
atctggggccggctcaccgcccgcctgccggacctgacgccggaggccctggcggccgcg
ccggacgatcctttgcgcgaggccggcctgtcggcgccgaagatccggaccctgcgggcg
gccgccgcggcgatcctcgacggcactctgccgctcgacaccctgcacgcgctgccggcg
gacgaggcccaccggctgatggtggcggtccacggcatcggcccgtggaccgcggacgtc
tacctgctgttctgtctcggccacccggacgccttcccggccggcgacctcgccctccag
gaggccgcgcgcctcgccgacgggctggagacccggccgagcgccgccgcgctgacgcgc
cgtgccgacgcctggcgcccgtggcgcggggtcgccgccaaggtcctgtgggcctcttac
cgggtggccaaggcgcgcgacggcgcgcctctgtctccctga
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