Methylobacterium indicum: mvi_15120
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Entry
mvi_15120 CDS
T07581
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mind
Methylobacterium indicum
Pathway
mind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
mvi_15120 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mind03021
]
mvi_15120 (rho)
03019 Messenger RNA biogenesis [BR:
mind03019
]
mvi_15120 (rho)
Transcription machinery [BR:
mind03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
mvi_15120 (rho)
Messenger RNA biogenesis [BR:
mind03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
mvi_15120 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA_25
AAA
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BCM83051
UniProt:
A0A8H8WRI9
LinkDB
All DBs
Position
1657006..1658319
Genome browser
AA seq
437 aa
AA seq
DB search
MIEDTLAPIETPAAPAMREVKLQDLKSKTPTELLAFAEEVEVENASTMRKQELMFAILKQ
LAAKDVEIIGAGTVEVLQDGFGFLRSSDSNYLPGPDDIYISPTQIRRFGLRTGDTVEGPI
RGPKDGERYFALLKVNTINFENPDKIKHKVHFDNLTPLFPTQRFKLELAEPTRKDFSPRI
IDIVAPIGKGQRALIVAPPRTGKTVLMQNIAQSITLNHPECYLIVLLIDERPEEVTDMQR
SVKGEVIASTFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSS
GKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNS
EIILDRKVSDKRIFPAIDITRSGTRKEELLVPPDALKKTYVLRRILNPMGVTDAIEFLLD
KLRQTKSNGDFFDSMNT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagatacgctcgccccgatcgagaccccggccgcccccgccatgcgcgaggtg
aagctgcaggatctcaagtccaagacccccaccgagctcctggccttcgccgaggaggtc
gaggtcgagaacgcctcgaccatgcgcaagcaggagctgatgttcgcgatcctgaagcag
ctcgctgccaaggacgtcgagatcatcggtgccggcaccgtcgaggtgctgcaggacggc
ttcggcttcctgcgctcctccgactcgaactacctgccgggcccggacgacatctacatc
tcgccgacgcagatccgccgcttcggcctgcgcaccggcgacaccgtcgaggggccgatc
cggggcccgaaggacggcgagcgctacttcgcgctgctcaaggtcaacacgatcaatttc
gagaacccggacaagatcaagcacaaggtccacttcgacaacctgacgccgctattcccg
acgcagcgcttcaagctcgaactggcggagccgacccgcaaggacttctcgccccggatc
atcgacatcgtcgcgccgatcggcaagggccagcgcgccctgatcgtggcgccgccgcgc
accggcaagacggtgctgatgcagaacatcgcccagtcgatcaccctcaatcacccggag
tgctacctcatcgtcctgctcatcgacgagcggccggaagaggtcaccgacatgcagcgc
tcggtgaagggcgaagtcatcgcctcgaccttcgacgagccggcgacccgccacgtccag
gtcgccgagatggtgatcgagaaggccaagcgcctggtggagcacggccgcgacgtcgtc
atcctgctcgactcgatcacgcgtctgggccgcgcctacaacaccgtggtgccgtcctcc
ggcaaggtgctgaccggcggtgtcgacgccaacgcgctccagcggcccaagcgcttcttc
ggcgctgcccgcaacatcgaggagggcggctcgctctccatcatcgccaccgcgctgatc
gataccggctcgcgcatggacgaggtgatcttcgaggagttcaagggcactggcaactcc
gagatcatcctggaccgcaaggtctccgacaagcgcatcttcccggcgatcgacatcacc
cgctcgggcacccgcaaggaggagctgctggtcccgccggacgcgctcaagaagacctac
gtgctgcgccgcatcctcaacccgatgggcgtcaccgacgcgatcgagttcctgctcgac
aagctgcgccagaccaagagcaacggcgacttcttcgactcgatgaacacctga
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