Methylobacterium indicum: mvi_15790
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Entry
mvi_15790 CDS
T07581
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
mind
Methylobacterium indicum
Pathway
mind02020
Two-component system
mind02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mvi_15790 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
mvi_15790 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mind03021
]
mvi_15790 (rpoN2)
Transcription machinery [BR:
mind03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mvi_15790 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
PKS_DE
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BCM83118
UniProt:
A0A0J6RPB0
LinkDB
All DBs
Position
complement(1722008..1723603)
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AA seq
531 aa
AA seq
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MGLLQRLEMRQGQALVMTPQLLQAIKLLQLSHLDLAAYVDAELERNPLLERAEAEAPEAG
ESRGESHGENYGEASDASRDGGDGDGFDGEGFSGEGSAEPWLSHDLNPSRSAIEGDLGTR
LDNVFPDDGPVGREAPTGSEGLSLTPAPWGNAGGSFDGEAPDFEATLTSESSLHEHLSAQ
LDLATRDPVERLVGGFLVDAIDEAGYLREDLAGLAERLGVGLPVVERVLALVQGFDPSGV
GARDLAECLAIQLREQDRFDPAMQALVSRLDLVAKRDLASLRRLCGVDDEDLADMLSELR
RLDPKPGRAFGAGPVEVLVPDVFVRAAPDGSWLVELNSEALPRVLVNQSYYATVTRGAQT
DTDKAFLSECLQTANWLTRSLEQRARTILKVASEIVRQQDGFFVNGVAHLRPLNLKTVAD
AIGMHESTVSRVTSNKSIGTSRGTFEMKYFFTAAIPGAAGAAAHSSEAVRHRIKQLIDGE
ANDVLSDDALVQRLRGEGVDIARRTVAKYRESLRIPSSIERRRERAAMPAR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgctgcaacggctcgagatgcgccagggccaggccctggtgatgacgccgcaa
ctcctgcaggcgatcaagcttctgcaactctcccatctcgacctcgccgcctatgtcgat
gccgagctcgagcgcaatccgctcctggagcgggccgaggccgaggcgccggaggccggc
gagtccaggggcgagagccatggtgagaactatggcgaggcgtcggacgcgtcccgggac
gggggcgacggcgacgggttcgatggcgagggcttctcgggagagggatcggccgagccc
tggctgtcgcacgacctgaacccgagccgcagcgcgatcgagggcgatctcggcacccgc
ctcgacaacgtgtttcccgatgacggcccggtgggccgcgaggcgccgacggggtccgag
gggctgtcgctgacccccgccccgtggggcaatgccggcggcagcttcgacggcgaggcg
ccggatttcgaggcgacgctgacgagcgaatcctcgctgcacgagcacctctcggcccag
ctcgacctcgccacccgcgatcccgtcgagcggctggtcggcggcttcctggtcgatgcg
atcgacgaggccgggtacctgcgcgaggacctggccgggctcgccgagcgcctcggcgtg
ggcctgcccgtcgtcgagcgggtgctggccctggtccagggcttcgacccctcgggcgtc
ggcgcccgcgacctcgccgaatgcctggcgatccagctgcgcgagcaggaccggttcgac
ccggcgatgcaggccctggtctcgcgcctcgacctcgtcgccaagcgcgacctcgcctcc
ctgcggcgcctctgcggggtcgacgacgaggacctcgccgacatgctgtcggagctgcgc
cgcctcgatcccaagcccggccgcgccttcggggccggcccggtcgaggtgctggtgccg
gacgtgttcgtgcgcgcggcccccgacggatcctggctcgtcgagctcaacagcgaggcc
ctgccgcgggtcctcgtcaaccagagctactacgccaccgtcacccgcggcgcgcagacc
gacaccgacaaggctttcctgtcggaatgcctccagaccgccaactggctcacccgcagc
ctggagcagcgcgcccgcaccatcctgaaggtggcgagcgagatcgtgcgccagcaggac
gggttcttcgtcaacggcgtcgcccacctgcggccgctcaacctgaagaccgtcgccgac
gcgatcggcatgcacgaatccaccgtctcgcgggtgacctcgaacaagtcgatcggcacc
agccgcggcaccttcgagatgaagtacttcttcaccgcggcgatccccggggcggcgggc
gcggccgcccattcgtcggaggccgtgcgccaccgcatcaagcagctcatcgacggcgag
gccaacgacgtcctgtcggacgatgccctggtgcagcgcctgcgcggcgagggcgtcgac
atcgcccgccgcacggtggccaagtaccgggaatccctgcgcatcccttcctcgatcgag
cgccggcgcgagcgcgccgcgatgccggcgcggtga
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