Methylobacterium indicum: mvi_20820
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Entry
mvi_20820 CDS
T07581
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mind
Methylobacterium indicum
Pathway
mind00040
Pentose and glucuronate interconversions
mind01100
Metabolic pathways
mind02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
mvi_20820
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
mvi_20820
Enzymes [BR:
mind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
mvi_20820
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Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BCM83621
UniProt:
A0A8H8WSK1
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Position
complement(2244737..2246653)
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AA seq
638 aa
AA seq
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MAQNLAHGFAAMNGGTSGGSGGPTVHVSTGAELQKAIDGVSATSGPLTIVVDGKITPANS
GVDAISIAGRNNISVIGGGSGAEFDGIGIRISGGSSNLIIQNLKIHNVATGPKDAIGIEG
PSRNIMIDHNELYSSMAVDKDYYDGLLDIKRGAEYITVSNNYIHDHHKASLVGYADEDTG
ARFVTYDHNVFENLGSRTPSVRDGHVHIYDNYFKDISASAINLRMGAVGLIENNVFENVR
DPIVSLDSTAPGYWDLRGNVMSGVTWSQTGAGEASAQDGRSTASYSVPYAYGLDAAAAVK
GEALAQAGVGRLDGAAPATGAPAPVPAPAPEPSPAVTPAPTPSEPAPIPVPPAPEPAPAP
TAGRPGDGGDLLTGTDGDDTLDGGAGRDVIHGAAGADTILGGAGRDTLFGEGGNDVLSGG
AGNDSLDGGAGDDSLSGGTGSDTLVGGIGNDTLEGGASADTLIGGDGDDWLDGGSNADAM
SGGAGNDTYVVDIARDTIVELTGEGIDTVRASTSYSLGANLENLVLTGAGKLNGTGNELA
NLLVGNDGDNRLDGGAGDDTLVGGAGKDTFAFTAGQGGHDRIDDFRFGEDMLLLKGYAPA
QVILTDGAAGTTLHMQNETVDLLGVHLDALGKDWIKFA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaacctcgcgcacggcttcgcggcgatgaacggcggcacctccggcggcagc
ggcggtcccaccgtccacgtctcgaccggggccgaactccagaaggcgatcgacggcgtt
tcggcgacgtccggccccctgaccatcgtggtcgacggcaagatcacgcctgccaacagc
ggcgtcgacgccatctcgatcgccggccgcaacaacatctcggtgatcggcggcgggtcc
ggcgccgagttcgacggcatcggcatccgcatcagcggcggctcgtcgaacctcatcatc
cagaacctcaagatccacaacgtcgccaccggcccgaaggacgcgatcgggatcgagggg
ccgtcgcgcaacatcatgatcgaccacaacgagctctacagctcgatggcggtcgacaag
gattattacgacggcctgctcgacatcaagcgtggcgctgagtacatcacggtctcgaac
aattacatccatgatcaccacaaggcgtcgctggtcggctatgccgacgaggataccggc
gcccgcttcgtgacctacgatcacaacgtgttcgagaatctcggctcgcgcacgccgagc
gtgcgcgacggccacgtccacatctacgacaactacttcaaggatatcagcgcctcggcc
atcaacctgcggatgggggcggtcgggctgatcgagaacaacgtgttcgagaacgtccgc
gacccgatcgtgagcctcgacagcacggcgccgggctactgggacctgcgcggcaacgtg
atgagcggtgtgacctggagccagaccggtgcgggcgaggcgagcgcccaggacggtcgc
tcgacggcctcctacagcgtgccctacgcctacggcctcgacgcggccgccgccgtgaag
ggcgaggccctggcccaggccggggtcggccggctcgacggagccgcccccgccaccggg
gccccggcgccggttcccgctcccgcgccggagccgtctccggccgtcacgcccgcgccg
actccgagcgagcccgccccgatcccggtgccgcccgcccccgagcccgcgccggccccg
acggcgggcaggccgggcgatggcggcgacctcctgaccggtacggacggcgacgatacc
ctcgacgggggggccggacgcgacgtgatccacggggcggccggggccgatacgatcctg
ggcggcgccggccgcgacaccctgttcggcgagggcggcaacgacgtcctgtcgggtggt
gcgggcaacgattccctcgacgggggagccggcgacgacagcctgtcgggcggaaccggc
agcgacacgctcgtcggcgggatcggcaacgacacgctggagggcggggcgagcgccgac
accctgatcggcggcgacggcgacgactggctcgacggcggcagcaacgccgacgcgatg
agcggcggcgccgggaacgacacctacgtcgtcgacatcgcccgcgacacgatcgtcgaa
ctcaccggcgagggcattgataccgtccgggcctcgacgagctacagcctcggcgccaac
ctcgagaacctggtcctgaccggagccggcaagctcaacgggaccggcaacgagctcgcc
aacctcctcgtcggcaacgacggcgacaaccgcctcgacggcggagccggggacgacacc
ctcgtcggcggcgccggcaaggacacgttcgcgttcacggcgggccagggcggccacgac
cggatcgacgacttccgcttcggcgaggacatgctgctcctcaagggctacgcccccgcg
caggtcatcctgaccgacggcgcggccggcaccacgctgcacatgcagaacgagaccgtc
gacctgctcggcgtccacctcgacgccctcggcaaggactggatcaagttcgcctga
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