Methylobacterium indicum: mvi_20900
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Entry
mvi_20900 CDS
T07581
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mind
Methylobacterium indicum
Pathway
mind00040
Pentose and glucuronate interconversions
mind01100
Metabolic pathways
mind02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
mvi_20900
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
mvi_20900
Enzymes [BR:
mind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
mvi_20900
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GFIT
Motif
Pfam:
Pectate_lyase_4
DUF7304
Motif
Other DBs
NCBI-ProteinID:
BCM83629
UniProt:
A0A8H8WSN1
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Position
2260318..2261670
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AA seq
450 aa
AA seq
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MPAPISRRPIPSLPLAAAALLGLAAPFAAFLASDARAAQSPVPPDRFLAAAREAADRAPP
ACAATARTGADGRVTESPLPAMIQGAAAGTTGGLGRRLYTVTRLDDAKASRSRPSPEGTL
RWAVEAARQGGGWIAFAPGLTGTLHLEAGLHLPSDTTLDGGCGGITLTAAPRTTQLTLTD
ARNVIVSGLTFTKDAYDDKADKTGDAIALTDQFDQVAILHNAFHRCGDGCVDIVRKERFA
SGARATVAFNHFAQHNKVMLIGTLTCYKDAAAEGCADPLAHLGDVMEPRVLVTVAGNVFA
GTSQRHPKVVSNAAVHLTNNLFALSPTAYSNGADSAVYGSATGTGGVLVAEGNIFVNPDR
AGRIGAGPISVVRASTGGGHEADGVVAAGDNVTVGNIRVVENRPEIARAVPIQAGAVLRV
SDKGPEALATCLLRIAGPQGATAAWPQACR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccggccccgatctcccgccgcccgatcccgtcgctcccgctggccgctgctgcgctg
ctcgggctcgccgcgcccttcgccgccttcctcgcgtccgacgcgcgggcggcccagtcg
ccggtcccgcccgaccgcttcctcgcggccgcccgggaggcggccgaccgcgccccgccg
gcctgcgcggccacggcgcggacgggcgccgacgggcgcgtgacggagagccccctgccg
gccatgatccagggcgccgccgccggcaccaccggtgggctcggccggcgcctctacacg
gtgacgcgcctcgacgacgccaaggcctcgcgcagccggccgagcccggagggcacactg
cgctgggccgtcgaggcggcgcgccaaggcgggggctggatcgccttcgcgccgggcctg
accggaaccctgcacctcgaggccggcctgcacctgccctccgacaccaccctcgacggg
ggctgcggcgggatcaccctcacggcggcgccgcgcacgacgcagctgacgctgaccgat
gcacgcaacgtcatcgtcagcggcctgaccttcaccaaggacgcctacgacgacaaggcc
gacaagaccggcgacgccatcgcgctcaccgaccagttcgaccaggtcgcgatcctgcac
aacgccttccaccgctgcggcgacggctgcgtcgacatcgtgcgcaaggagcgcttcgcc
tccggcgcccgggcgaccgtcgcgttcaaccacttcgcacagcacaacaaggtcatgctg
atcggcacgctgacctgctacaaggacgcggcggcggagggctgcgccgacccgctcgcg
catctcggcgacgtcatggagccccgggtcctcgtcacggtcgccggcaacgtctttgcg
ggcacgagccagcgccaccccaaggtggtctcgaacgccgccgtccacctgaccaacaac
ctgttcgcgctgagcccgaccgcctattccaacggggccgacagcgccgtctacggctcg
gccaccggcaccggcggcgtgctggtcgcggagggcaacatcttcgtcaacccggaccgg
gccggccggatcggcgccgggccgatctcggtggtccgcgcctcgaccggcggcgggcac
gaggccgacggggtcgtggccgcgggcgacaacgtcacggtcggcaacatccgggtggtc
gagaaccggcccgagatcgcccgcgcggtcccgatccaggccggggcggtgctgcgggtc
tccgacaagggccccgaggccctcgccacctgcctcctgcggatcgccgggccgcaggga
gcgacggcggcatggccgcaggcatgccggtga
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