Methylobacterium indicum: mvi_46140
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Entry
mvi_46140 CDS
T07581
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mind
Methylobacterium indicum
Pathway
mind00300
Lysine biosynthesis
mind00470
D-Amino acid metabolism
mind01100
Metabolic pathways
mind01110
Biosynthesis of secondary metabolites
mind01120
Microbial metabolism in diverse environments
mind01230
Biosynthesis of amino acids
Module
mind_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
mvi_46140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
mvi_46140 (dapF)
Enzymes [BR:
mind01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
mvi_46140 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
BCM86153
UniProt:
A0A8H8WX63
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Position
complement(4994046..4994933)
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AA seq
295 aa
AA seq
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MSPLAHRRFLKMNGLGNEIVVLDLRGSDVRVQPAEARAIAADPASRFDQMMVLHDPVTPG
TDAFVRIYNTDGSEAGACGNGTRCVAWAMLDDPAMARPPLGENLVLETRPGLLAVVRVSP
VDFTVDMGRPRLKWDEIPLAEPFPDTRRIELQVGPIDDPVLHSPGAVSMGNPHAVFFVAR
DPETYDLARVGPLLECHPIFPDRANISLAQVLDRGHLRLKVWERGAGLTRACGTAACAAL
VAAARLRLTDREATVTLPGGDLRIAWGEDDHVRMTGPTELEHEGTFAPSLFEAAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccccctcgcccatcgccgcttcctcaagatgaacgggctcggcaacgagatcgtg
gtgctggacctgcgcgggagcgacgtgcgggtgcagcccgccgaggcccgggcgatcgcg
gccgatccggcctcgcgcttcgaccagatgatggtgctgcacgaccccgtcaccccgggc
accgacgccttcgtccggatctacaataccgacggttcggaggccggcgcctgcggcaac
ggcacccgctgcgtcgcctgggcgatgctggacgatcccgcgatggcgcgcccgcctttg
ggggagaacctggttctcgagacccggcccggcctcctcgcggtcgtgcgggtgtcgccg
gtcgacttcaccgtcgatatggggcggccgcgcctgaagtgggacgagatccccctcgcc
gaaccctttcccgatacccgccgcatcgagctgcaggtcgggccgatcgacgatccggtg
ctgcactcgccgggggcggtcagcatgggcaatccgcacgcggtgttcttcgtcgcgcgc
gaccccgagacctacgacctcgcccgggtcggcccgctgctcgaatgccacccgatcttc
ccggaccgggccaacatctcgctcgcccaggtcctcgaccgcggccatctccgcctgaag
gtctgggagcgcggcgccggcctgacccgggcctgcggcaccgcggcctgcgccgccctc
gtcgccgccgcgcgcctgcgcctcaccgaccgcgaggccaccgtcaccctgccgggcggc
gacctgcgtatcgcctggggcgaggacgaccacgtccgcatgaccggcccgaccgagctg
gagcacgagggcaccttcgctccctcgctgttcgaggccgccgcgtga
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