Methylobacterium indicum: mvi_51560
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Entry
mvi_51560 CDS
T07581
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mind
Methylobacterium indicum
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mind03400
]
mvi_51560 (phrB)
Enzymes [BR:
mind01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
mvi_51560 (phrB)
DNA repair and recombination proteins [BR:
mind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
mvi_51560 (phrB)
Prokaryotic type
mvi_51560 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BCM86695
UniProt:
A0A8H8WY12
LinkDB
All DBs
Position
5591861..5593255
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AA seq
464 aa
AA seq
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MDMAIQAGRIRVLKDVEPRDGAYVLYLMQQGMRSRDNPALEYAVEEANRLGLPVVAGFGL
LDGGAHFPEANARHYAFLLQGLADARAGLEHRGIAFVLRRATPAKAALTLGRQAAMLVLD
RGYLTIQKQWYAEIEKGFDGRLVQVEGDVVVPLEVASGKHEFAARTLRPKLHRTWEPYLA
PLRARRVKHKADDLSLTSDLDVSDSDAALAAMTLDRDVPPVRRFRGGEVEAHRRLAAYLA
GPFDEYGTVRNKPEAGAASHMSPYLHFGQISPVAIALKVQAAKTGGPEDRAAYLEELIVR
RELAMNHVHTNPGYGAYATALPDWSRKALAEHADDPRPHLYDEAALAEGRTHDEYWNAAM
REMRVTGYMHNHLRMYWGKKILEWSPSPEEAFAVALRLNNRYFLDGRDANSFTNVAWLFG
LHDRPWGRRKVFGTVRYLGPNTLKKFDAKAYLKTVDALCRAEEA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcgattcaggcggggcgcatccgggttctcaaggacgtggagccgagggac
ggcgcctacgtgctctacctgatgcagcagggaatgcgcagtcgcgacaacccggccctc
gaatacgccgtcgaggaggccaaccgcctcggtcttccggtcgtcgcggggttcggcctc
ctcgacggcggcgcgcatttccccgaggccaatgcccggcactacgccttcctgctccag
ggcctcgccgatgccagggcgggcctggagcaccgcggcatcgccttcgtgctgcgccgg
gcgaccccggccaaggctgccctgactttgggcaggcaggcggcgatgctggtcctcgac
cgcggctacctgacgatccagaagcagtggtacgccgagatcgagaagggattcgacggc
cgcctggtccaggtcgagggcgacgtggtggtgccgctcgaggtcgcctcgggcaagcac
gaattcgccgcccgcaccctgcggccgaagctgcaccggacctgggagccctatctcgcg
cccctgcgggcccgcagggtcaagcacaaggccgacgacctgtccctgacgagcgacctc
gacgtctcggattccgacgccgcgctcgccgcgatgaccctcgaccgcgacgtgccgccg
gtgcggcgcttccgcggcggcgaggtcgaggcgcatcgtcgcctcgccgcctaccttgcc
gggccgttcgacgagtacggcacggtgcgcaacaagcccgaggcgggagccgcctcgcac
atgagcccctacctgcatttcggccagatctcgccggtggcgatcgccctcaaggtgcag
gcggccaagaccggcggcccggaggaccgggcggcctatctcgaggagctgatcgtccgg
cgcgaactggcgatgaatcacgtccacaccaacccgggttacggggcctacgccacggcc
ctgccggactggtcgcgcaaggctttggccgagcacgcggacgacccgcgcccccacctc
tacgacgaggcggctctcgccgagggccgcacccacgacgagtactggaacgccgcgatg
cgcgagatgcgcgtcaccggctacatgcacaaccatctgcgcatgtactggggcaagaag
atcctcgaatggtcgccctcgccggaggaggcctttgcggtggcactgcgtctcaacaac
cgctacttcctcgacggccgcgatgcgaactccttcaccaacgtcgcctggctgttcggt
ctgcacgaccggccctggggccggcgcaaggtcttcggtacggtacgctatctcggcccg
aacaccctgaagaagttcgacgccaaggcctacctgaagaccgtcgacgcgttgtgccgg
gccgaggaggcgtga
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