Methylobacterium indicum: mvi_54950
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Entry
mvi_54950 CDS
T07581
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mind
Methylobacterium indicum
Pathway
mind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
mvi_54950 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mind03019
]
mvi_54950 (pnp)
03016 Transfer RNA biogenesis [BR:
mind03016
]
mvi_54950 (pnp)
Enzymes [BR:
mind01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
mvi_54950 (pnp)
Messenger RNA biogenesis [BR:
mind03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
mvi_54950 (pnp)
Transfer RNA biogenesis [BR:
mind03016
]
Prokaryotic type
tRNA degradation factors
mvi_54950 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
DUF7357
S1_RRP5
OB_RRP5_4th
PHB_acc_N
Motif
Other DBs
NCBI-ProteinID:
BCM87034
UniProt:
A0A0J6RCE8
LinkDB
All DBs
Position
complement(5947882..5950050)
Genome browser
AA seq
722 aa
AA seq
DB search
MFDVQREELLWGGRKLVLETGKVARQADGAVVATYGETSVLATVVSMKEPKPGIDFLPLT
VNYQERTYAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVEGWRNDTQVVVTVLSH
DLETDPDILAMVAASAALTLSGVPFMGPIAAARVGYVGGQYKLNPPIQEMEGSTLDLVVA
GTQDAVLMVESEAKELPEDVMLGAVMFGHKHFQPVIEAIIRLAEKAAKEPRNFQPADNSE
VEKAVLEVGEADLREAYKNTVKQERYAAVDAVKAKVMAALAPAEGEARFEAEKIKAAFKE
AQSKVVRWNILDTGSRIDGRDVKTVRPIVSEVGVLPRTHGSALFTRGETQALVVATLGTG
DDEQFIDALSGTYKETFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAVHPVLPAAH
EFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLRRPVAGIAMGLILEGERYAVLS
DILGDEDHLGDMDFKVAGTEEGITSLQMDIKIAGITEEIMRVALAQAKDGRATILAEMAK
ALTAARPELGEHAPRIETMQIPTDKIREVIGTGGKVIREIVEKTGAKIDIQDTGIIKIAS
ADGKAIKAAYNWIRSIVAEAEVGMIYEGTVVKTMEFGAFVNFFGAKDGLVHISELAAQRV
AKVTDVVKEGDKVKVKFLGQDDRGKIRLSMKVVDQETGEDLTEKLKAQRDADRSRERQPR
GE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgttcaacgcgaagagctgctgtggggcgggcgcaagctcgtgctcgagacc
ggcaaggtcgcccgccaggccgacggcgccgtggtcgccacctacggcgagacctcggtg
ctggccaccgtggtgtcgatgaaggagccgaagcccggcatcgatttcctgccgctcacg
gtgaactaccaggagcgcacctacgccgccggccgcatcccgggcggctacttcaagcgc
gagggccgtccctccgagaaggagaccctggtctcccgcctgatcgaccggccgatccgc
cccctcttcgtcgagggctggcgcaacgacacccaggtcgtcgtcacggtgctctcgcac
gacctcgagaccgatcccgacatcctcgccatggtggcggcctccgcggcgctgaccctc
tcgggcgtgccgttcatgggcccgatcgccgccgcccgcgtcggctatgtcggcggccag
tacaagctcaacccgcccatccaggagatggagggctcgaccctcgacctcgtcgtcgcc
ggcactcaggacgccgtgctgatggtcgagtccgaggcgaaggagctgcccgaggacgtg
atgctcggggccgtgatgttcggccacaagcacttccagccggtcatcgaggcgatcatc
cggctcgccgagaaggccgccaaggagccgcgcaacttccagcccgcggacaattccgag
gtcgagaaggccgtgctcgaggtcggcgaggccgacctgcgcgaggcctacaagaacacc
gtcaagcaggagcgctacgccgccgtcgacgccgtcaaggcgaaggtgatggccgcgctt
gctcccgccgagggtgaggcccgcttcgaggccgagaagatcaaggccgccttcaaggag
gcccagtcgaaggtggtccgctggaacatcctcgacacggggtcccgcatcgacggccgc
gacgtgaagaccgtgcgtccgatcgtgtccgaggtcggcgtgctgccccgcacccacggc
tcggccctgttcacccgcggcgagacccaggcgctggtcgtggcgacgctgggcaccggc
gacgacgagcagttcatcgacgcgctctcgggcacctacaaggagacgttcctccttcac
tacaacttcccgccctattcggtgggcgagaccggccgcatgggctcgcccggccgccgc
gagatcggccacggcaagctcgcctggcgcgccgtgcacccggtcctgccggccgcccac
gagttcccctacacgatccgcgtcgtgtcggagatcaccgagtcgaacggctcgtcctcg
atggcctcggtctgcggcgcctcgctgtcgctgatggatgccggcgtgcccctgcgccgt
ccggtggccggcatcgccatgggcctcatcctcgagggtgagcgctacgcggtcctgtcc
gacatcctcggcgacgaggaccacctcggcgacatggacttcaaggtggccggcacggag
gagggcatcacctcgctccagatggacatcaagatcgccggcatcaccgaggagatcatg
cgggtggccctggcccaggccaaggacggccgtgcgaccatcctcgccgagatggcgaag
gccctgacggcggcccgtcccgagctcggcgagcacgcgccgcgcatcgagacgatgcag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtggaaaaaaccggcgccaagatcgacatccaggataccggcatcatcaagatcgcctcg
gccgacggcaaggcgatcaaggcggcctataactggatccgctcgatcgtggcggaagcc
gaggtcggcatgatctacgagggcaccgtcgtgaagacgatggagttcggcgccttcgtc
aacttcttcggcgccaaggacggtctcgtccacatctccgagctcgccgcccagcgcgtc
gccaaggtcaccgacgtggtgaaggagggcgacaaggtgaaggtgaagttcctcggccag
gacgatcgcggcaagatccgcctgtcgatgaaggtcgtcgaccaggagaccggcgaggac
ctgaccgagaagctgaaggcccagcgcgacgccgaccgctcccgcgagcgtcagccgcgc
ggcgagtga
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