Mesotoga infera: MESINF_1799
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Entry
MESINF_1799 CDS
T05565
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
minf
Mesotoga infera
Pathway
minf03410
Base excision repair
minf03430
Mismatch repair
minf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MESINF_1799
03430 Mismatch repair
MESINF_1799
03440 Homologous recombination
MESINF_1799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
minf03400
]
MESINF_1799
DNA repair and recombination proteins [BR:
minf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MESINF_1799
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MESINF_1799
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MESINF_1799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
SSC13243
UniProt:
A0A7Z7LFN9
LinkDB
All DBs
Position
MESINF:complement(1867147..1870290)
Genome browser
AA seq
1047 aa
AA seq
DB search
MRKEWLLLKPDDESVKRLVEYLGIDTFLARLLVTRGIKDEIEAMKFLNPDKTILHDPFIL
QDMTVAVRTIIGARDRDESIVIFGDYDVDGVTSTALLYLAMKRMGFKVSYYIPLRLEEGY
GLSRDALKDLRDRGHSLLITVDCGVTSFSEIEYAREIGFDVVVTDHHEVKDILPPANAVI
NPKRPDDSYPFKGLAGVGVAFKLLVALNETLRCPINPEEYLDIVALGTIADIVPLRDENR
YIVREGTAKIQSSPLLGLKALLSYLRIPSENLTAQDIAFKIAPKLNAAGRMDSAIVALEL
LISEDMDSAMNTASRLLKHNQNRQTIEAKIFEQTSKDLEINHRMNDDFALVIDGDNWHLG
VLGIVASRLVSIHNKPVFLISTTGQDGKGSARSPSGVSIISLLNEVSSLLREFGGHEMAA
GFSIDKENIPEFRRAINEAYIRQYGRKLPVFKIDVDDVLSLESITPHVLDKLEILRPFGH
SNPEPKFLIKGLNIEKAKTFGSGSDHVKMILRSGDRKTLAIGYNMSSIFDDFKYVKPNLL
KVDAVASIKSDNLYGLQSVKLSLSDVNLYIDPVFEEEVRDKNFVFEFIRDWKNQQPASQV
KNDVSALISELEKKLSHKCPEFMDISSKSPWGTFGNIRLKNPFLALRILRNYQKGLKTFI
VSAINGTLAHTYYSLQHYLDAIKPVFANSLYRGSLEENVIFVTLPFFVENFARILETAGE
VIFDEPAYILSGIFKGHPDLEGFLSLIDSVLDISGFTGSVYYDDLKEFLADRRISHVYKP
NPIKKVGIIDNRGSRKKVEQVMSIVGHGENVAVIVDSPHKTVTLAKSMGSRLSHALQNGE
LIFYNYMLKDFQRSVIYSLVERQKIRVLITTPSSDGLGVTLGNSNIVFYSAPRNFLEVLD
SVSTRPGEDSELFLNLSFNKSDLLSNTSEMDRLFPTIEELEAVYQDLKDVLPAPERDIRK
ALSFEDGISKVYLSILEEMNLLNYDGNVWYSSSNGELDTTLVKKTLRYREGIAEKRMTRW
FATKLSTMTTRGLLRSLTNSEEVLRVG
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggagtggcttctgcttaagcccgacgatgaatctgtgaagaggctcgtcgag
tatttgggaatagatacttttttggccagattgcttgttacaaggggtataaaagacgaa
atcgaagctatgaagttcctgaacccagataagacgatccttcacgatccttttatactc
caggacatgacggtagccgtcagaaccattatcggtgcgagagacagagatgagagtatc
gtgatcttcggcgattacgatgtggacggcgttaccagtaccgcactgctttatttggca
atgaagagaatgggcttcaaagtcagctattacatacccctgagactcgaggagggctac
ggtctcagtagagacgccctcaaagatctccgtgacaggggtcacagtctcctgataact
gtagattgcggagtaacatcgttcagtgaaatagagtacgcaagagaaatcggattcgat
gtggtagtcaccgatcaccacgaagtaaaggacattcttcctcctgcaaacgcggttatc
aatccaaagagacctgacgattcttatcccttcaaagggttggccggtgtcggagttgct
ttcaaacttctggtggcgttgaatgagacgctgcgttgccccatcaatcccgaagaatat
ctagacatagtagcccttggaactatagccgacattgtaccactgcgcgacgaaaataga
tacatcgtgagagaaggaacggcgaagatacagagcagccctcttctggggttgaaagct
ctcctatcttatttgagaattccttcggaaaatctgacggcccaagatatcgccttcaag
atagcacccaaactcaatgcggcaggaagaatggattcagccattgtggcactggagttg
cttattagcgaggacatggattcggcaatgaacacggccagcagacttttgaagcacaat
cagaatcgccagacgatcgaggccaaaattttcgagcagacttccaaagatctagagata
aaccatcgaatgaacgacgatttcgcactcgtcatcgatggagataactggcaccttgga
gtactgggcatcgtcgcttcaagacttgtctctatacacaacaaacctgtttttctcatc
tccaccactggacaggacggaaagggatcggccaggagtccttctggagtcagcataatc
agtttgttgaacgaggtctcttctctgctcagggagttcggagggcatgaaatggccgct
ggcttcagtattgacaaagaaaacattccggaatttcgcagggctatcaatgaagcttat
ataaggcaatacggaagaaaattgccagtctttaagatagatgtggacgacgttttgtct
ctcgaatcgataactccccacgtattggacaaactcgagattctcagacctttcggacat
tcgaatcccgaacccaagtttctgataaagggtctgaacatagaaaaggccaaaaccttc
gggagtggaagcgatcacgtgaagatgatcctccggtcgggcgatagaaaaacactcgca
ataggctacaacatgagttccatttttgatgacttcaaatacgtaaaacccaatcttttg
aaggtggatgccgttgcctctataaagagcgacaacctctacgggctccaaagcgtgaag
ctttcgctttcagatgtcaatctgtacatagatcccgtcttcgaagaggaagtcagggac
aaaaactttgtttttgaattcataagggactggaaaaatcagcagcctgcttctcaggtt
aagaatgacgtctcggctttgatttcagaactcgaaaagaagctctcgcacaaatgcccg
gaattcatggatataagttcgaagagtccctggggcaccttcggcaatatacgtttgaag
aacccctttcttgccttaaggatattaagaaactaccagaaagggctgaagaccttcata
gtttcggctatcaacggaacgctcgcacacacttactactctcttcaacattacctcgat
gcgattaaaccagtttttgccaattctctgtacaggggaagtctagaagagaacgttata
ttcgttacccttcccttcttcgtcgaaaactttgcaaggatcttggaaaccgcaggagag
gtaatatttgacgaaccggcctatattctctcgggtatattcaagggccatcctgatctc
gaaggctttttaagtcttattgattcggttttggacatatcgggcttcaccggaagcgtg
tattacgacgacctcaaggagtttcttgccgataggagaatctcccacgtttataagccc
aaccccataaaaaaggtaggtatcatagacaacagaggctcccggaaaaaggtcgagcaa
gtcatgtccatcgtcggtcatggagaaaacgtagcagttatcgtcgattctccacataag
actgtgacgctggccaaatcaatgggttcgaggctttctcacgcccttcaaaacggcgag
ttgatattctacaactatatgttaaaggacttccagagatcggtgatctactcgttggtc
gaaagacaaaagattagagttctgatcaccacgccctccagcgacggactcggagtcacg
ttaggaaattctaacatcgtattttacagcgctccgagaaactttctggaggttctcgat
tccgtctcaacgaggcctggcgaagactccgagctcttcttgaacctctcgttcaacaaa
agcgacctgctttcgaacacaagcgaaatggacaggcttttccctactattgaagagctg
gaagccgtctatcaggatttgaaagatgtacttcccgctcccgaaagagatataagaaag
gctttgagcttcgaagacggtatctccaaggtctatctttcgattctggaagagatgaac
ctgctgaattacgatggcaatgtgtggtacagcagttcgaatggagaactggatactact
ctggtcaaaaaaacccttagatacagagagggtatagctgaaaagagaatgacgcgctgg
tttgccacaaagctttcgactatgaccaccaggggactgttgcgcagtcttaccaattcc
gaagaggtgctgagagttggttga
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