Mesotoga infera: MESINF_2212
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Entry
MESINF_2212 CDS
T05565
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
minf
Mesotoga infera
Brite
KEGG Orthology (KO) [BR:
minf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minf03032
]
MESINF_2212 (topA)
03400 DNA repair and recombination proteins [BR:
minf03400
]
MESINF_2212 (topA)
Enzymes [BR:
minf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MESINF_2212 (topA)
DNA replication proteins [BR:
minf03032
]
Prokaryotic type
DNA Topoisomerases
MESINF_2212 (topA)
DNA repair and recombination proteins [BR:
minf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MESINF_2212 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_IS1595
TackOD1
Zn_ribbon_RPB9
Zn_ribbon_6
Clostridium_P47
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
SSC13652
UniProt:
A0A7Z7LGQ7
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All DBs
Position
MESINF:complement(2319479..2321695)
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AA seq
738 aa
AA seq
DB search
MPDKLVIVESPAKAKTIERYLGKGYEVTASKGHIRDLPESTLGIDTETFEPTYEILKGKE
KIVAELTMKAKGKKVLLASDLDREGEAIAWHIAQLLGLSSKDTNRIVFNEITESAIKEAV
EKPRTIDMSKVEAQVARRILDRIVGYKLSPLLWRTMTKGLSAGRVQSVALKFMVELEKKI
MVFVPHDFFKIFMLVGNDRFTLTELQGKKFGNRSITTQEELDTVLKGLKASLFFVKEVKK
RLSKRASPMPFITSTLQQSAISELGWSASRTMKVAQQLYEGIETEKGQIAFITYMRTDST
RISSQAREKAVEIIKNNFGERYIGPIKASKGGKKIQDAHEAIRPTYPEIDMEAAKKLISG
DFLKLYALIWNRFLASQMAGAEYEVTEVTVIDKSDRFAFTLVGEKRVFDGFERVLTRSSK
DELNHEYGQGQEIKPDDFIWEKETTKPPSRFTEASLVKELEKRGIGRPSTYATIISTLLD
RKYVLRQSKELRPTLLGAIVNEFLTDHFPDVVDTNFTANMENELDEVEGGSKKWKEVIES
FYDEFKTDLDQIDRKIKNGEFKIEFPTDRECECGSHFKVVFGRYGGYLKCPECDKNESID
MTIFSGVIDGKVILKDILQEQKKEREIDEKCPQCGSPLLLRKGRFGEFIACSAYPKCKYT
RNMEIPAPCPKCGGTIGKLRSKKGKNYFKCSSCGELYWSEPTNMKCVACDSTLFIKVKRG
GKKVYYCEKCKKEYPIEE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgccagacaaattagttatcgtagaatccccggcaaaagcgaaaaccatcgagaggtat
ctggggaaaggctacgaagttacggcttcgaagggtcacataagagatcttcctgaatcc
actctcggtatagacacagagaccttcgagccgacttacgaaattctcaaggggaaggaa
aagatcgtcgcagaactcactatgaaggcgaagggcaagaaagttcttctcgcgtcggac
ctggaccgcgaaggtgaggcgatagcctggcacattgcacagcttctgggactgtcaagc
aaggatacaaacaggatcgtcttcaacgaaataacagaatctgccataaaagaggcagtt
gaaaagcccaggacgatagacatgtccaaagtcgaagcacaggttgcccgccgcattctc
gatagaatagtcgggtacaaactcagccctcttctgtggagaacgatgaccaaaggattg
agcgcgggaagagtgcaatcggtagctttgaagttcatggtagaacttgagaagaagatc
atggtcttcgtgccccacgatttctttaagatcttcatgcttgtgggcaatgataggttc
acactaaccgaacttcaaggtaaaaaattcggaaacaggtcgatcactacgcaagaggaa
ctggacacagtcttgaaaggacttaaagcctctctattcttcgtaaaagaagttaagaaa
agactttcaaagagggcttcccccatgccatttataacttctacccttcagcagagtgcc
ataagcgaactcggctggagcgccagccggacgatgaaggttgcccagcagctgtacgaa
gggattgaaacggagaaggggcagatagccttcataacttacatgagaaccgactcgacc
aggatttcttcacaggcgagagagaaggccgtcgagataatcaagaacaattttggtgaa
agatacatcgggcctataaaagcatctaagggcggaaaaaagatacaagatgcccacgaa
gcgattagaccgacttatcctgagatcgacatggaggctgcaaagaaactgatttcggga
gattttctcaaactttatgccttgatatggaatagatttctggcttcgcagatggccggc
gctgagtatgaagtgactgaagtgaccgtaattgataaaagtgatcgtttcgcatttacc
ctcgttggcgaaaaaagagtcttcgacggttttgaaagggttttaaccagatccagcaag
gatgaactcaatcatgagtacggtcaaggacaggagatcaagcctgatgacttcatctgg
gaaaaggaaactaccaagcctccctcaagattcaccgaggcttcactggtcaaggaactg
gagaaaagagggatcggcaggccttcaacttacgccacgatcatttcgactctactcgac
agaaagtatgtactccgtcagtcaaaggagttacggccgacgcttctgggagccatagtc
aatgaatttctcaccgatcactttcccgatgtggtcgatacaaatttcactgcgaatatg
gaaaatgaactggacgaggttgaaggcgggtcgaaaaagtggaaagaagtaatagagagc
ttctatgacgaattcaagaccgatctagaccagatagacagaaagataaagaatggagag
tttaagatcgagttcccaacagatagagaatgtgaatgcggtagccatttcaaagtggtg
ttcggaagatacggcggttatctgaaatgtccggaatgcgacaagaatgagtcgatcgat
atgacgatcttttcaggtgtcatagatggtaaggttatcctgaaagatattctgcaagag
caaaaaaaagaaagggagatagatgagaaatgtccccagtgcggttctccgctcctgctt
aggaagggtaggtttggcgaattcatcgcctgctcggcttatcccaaatgcaaatacacc
aggaatatggagattccggctccatgtcctaaatgtggagggacgatcgggaaactgcgt
agcaaaaaaggaaagaattacttcaagtgctcttcgtgcggagaactttactggagcgag
ccgaccaacatgaagtgtgtagcatgcgactctacgctcttcataaaagttaaacgtggc
ggaaagaaggtttattactgtgaaaagtgtaaaaaggagtaccctatagaggagtag
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