Macadamia integrifolia (macadamia nut): 122057097
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Entry
122057097 CDS
T07436
Name
(RefSeq) LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122057097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ming03032
]
122057097
03400 DNA repair and recombination proteins [BR:
ming03400
]
122057097
DNA replication proteins [BR:
ming03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122057097
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122057097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
122057097
NCBI-ProteinID:
XP_042475033
LinkDB
All DBs
Position
12:29542593..29549631
Genome browser
AA seq
1310 aa
AA seq
DB search
MANMFLGVRFVLMGFDPLLEAEIRSKLVDGGGVDVGYGPSCTHVIVDSIVNDDSVCVAAR
NDGKTLVTGLWVEHSFDIGMPADASSILYRPVKDLNGIPGAKSLYVCLTGYQSQDREDIM
KMVGMMGAQFSKPLVANKVTHLICYKFEGEKYELAKKMKKIKFVNHRWLEECLRAWKIVP
EGKYAKSGYELEIMEAEAKDSEEETGEDYSNKQCEGMDVTGSPFGLTSGTAIDSKSPMPT
GEVLEICQTIVLPKGLSNSAENVIANNRLLTTPEKETRSGEAPYFHDVNRRGHGDFSCHG
NGTPFGDAIGGGTSIPFDTVSNFTKECNESTSNSRTARSLHSDAAKIITVSYSRRTPRRS
SVSTSAEPSGPSHEFSQGGLEGKKINLGIGTYSSTVEEAKDNIDLDCGALYHQGPKTGTL
PQKKERAVTSNGIRSPNEGSHDPKVCTSVSPSGGTLEGLKFEPMMIGRPPTRTDPTPNAD
KHDPNAIACVNFVENQRNGPPTMNSLSSDRKSLKCGLPVLETFTSDSTESPSMRIAGLPQ
EKTFEISMGALKSFDFASDPNIGDVKIGRAADLPAERETEPQVQPQDVKVSSPNIKTTVS
EESKNPISLGICKGVNDRLVTKNMVGQKGLGSRLRPSTAKSNKLKCSFSFDKTATLNGAA
FCPMMGVDGAEDEQKVAEKHEISWPTSAADVIMGEEIKGEKTANLNDETESQEDKDGDEL
EKPLTEKSEMAKPTSYADSSTLDADAVPVEEGKGEDEYSKSLSVKKTDMFESRKAVSTAV
AGIKTYQKGKKGNELRQGKVGAELDKAIDNKKTGIHESTLKEEMVKEEKHSSKKIKGNTL
SSGYEIEISDKGKDKEELEEGQEESELKKSFTGEMTEAGKSTFQADAVKKDISKRKRHPS
SKTNRKAISTANEIEMSDEGESREEAQKNIGVQKKEVSKAYPTGKTLAASKRKKPVDAEK
ENKPITDDVPNVNMSKHGRTSEALIRSNKMVGETDLNTFQAGGSCNIVNHEPVWFILSGH
HLQRKEFQQVIRRLKGRLIKDSHHWSYQATHFIVPEPVRRTEKFFAAAASGRWILKTDYL
TDSNQAGKFLPEEPYEWYRSGLSEDGTINLVAPRKWRLLRKRTGHGALYGLRVIIYGECT
APPLDTLKRVLKAGDGTILATSPPYTRFLKSGVDFAIVSPGIPRVDSWVQEFLRHEIPCV
LADYLVEYVCKPGYSLERHVLYNTHAWSEKSFANLLARSEENIKALXDGEVMMNCSDKAG
SEGCGIXYAIAVIPSFEDIPVENWLCSKCSEDDGTRIPKGTKRRPSLSRI
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatgtttcttggcgtccgtttcgtccttatgggatttgatccccttctcgaa
gcggagattcgatctaagcttgttgatggaggtggagttgatgtcgggtacggtcccagt
tgtactcacgtaatcgtagatagtattgttaatgatgattctgtttgtgttgctgctcgc
aacgatggcaaaacacttgttactggcttatgggttgagcatagttttgatatcggaatg
cctgcggatgcaagttcgattttgtacaggcctgtaaaagatttaaatggaatcccaggt
gccaaatctctatatgtttgcttgacaggataccaaagccaagatcgagaagatattatg
aaaatggtaggcatgatgggcgcacagttctccaagccactggttgcaaataaagttacc
catcttatatgttacaaatttgaaggagagaagtatgagcttgcaaagaaaatgaagaag
ataaaatttgtcaatcatcggtggttggaagagtgtttaagagcatggaaaattgtcccg
gaaggtaaatatgccaagagtggttatgagttagagatcatggaagctgaagctaaggat
tctgaagaagaaactggggaggattatagtaataagcaatgcgagggtatggatgtcaca
gggagcccctttggcttaacaagtggaactgcgatagactccaaatcgcccatgcccaca
ggggaagtgttagagatctgtcagacaattgtcttgcctaaaggtttgtcaaatagtgcc
gaaaatgttattgctaacaataggctattaactactcctgaaaaagaaaccagatctggt
gaagccccatacttccacgatgtaaatagaaggggccatggggacttcagctgtcatggt
aatggaactccttttggggatgctattggtggtgggacatccattccatttgacactgta
tccaacttcactaaggaatgtaatgaatcaacatctaattcaagaactgcacgatccctt
cattctgatgcagcaaagataattacagttagttactccaggagaaccccaaggaggtcc
tcagtttctacttctgcagaaccttcaggtccttcacatgaattttcgcaaggaggttta
gaaggaaagaagatcaatcttgggattggcacttattcctcaacagtagaagaagccaag
gataatattgatttggattgcggagctttatatcatcagggaccaaaaactggtacatta
cctcagaagaaagagcgggctgttactagtaatggcatcagatcaccaaatgaaggaagt
catgatccaaaagtctgtacttctgtaagtccatcaggaggtactcttgaaggtttgaag
tttgaaccaatgatgattggtagacccccaacaagaactgatcctacacctaatgctgat
aaacatgatccaaatgccattgcttgtgtgaattttgttgagaatcagcgaaatggtcca
ccaacgatgaactccttaagttctgatcggaaatcattgaaatgtggattgcctgttttg
gaaacttttacttccgatagtactgaatctcctagtatgaggattgctggccttcctcag
gagaagacatttgaaatatcaatgggggctttaaaaagttttgactttgctagtgatccc
aatataggggatgtcaaaatcggcagagcagctgaccttcccgctgagagagaaacagag
cctcaggtgcagccccaggatgtcaaggtttcatctcccaacatcaaaaccacagtaagt
gaggagtccaaaaatcctattagtttgggcatatgtaagggagtgaacgatagattggtt
accaagaatatggttggccaaaaaggtttgggctctaggcttaggccaagtactgccaag
agtaataagctgaagtgttcctttagctttgataaaactgcaactctaaatggagctgct
ttctgtccaatgatgggtgtagatggagcagaagatgagcaaaaagttgctgagaaacac
gaaatttcttggccaacttctgctgcagatgtaatcatgggggaagagataaagggggag
aagactgcaaatctcaatgatgagactgaatcacaagaggacaaagatggtgatgagctt
gagaagccactcactgaaaaatctgagatggctaagccaacctcttatgctgattcatca
accttggatgctgatgcagtgcctgtagaagaaggcaagggtgaagatgagtattcaaag
tctttaagtgtaaagaagactgatatgtttgagtcaaggaaagcagtatctactgcggtg
gctggaatcaagacataccagaaaggaaaaaaggggaatgagctaagacaaggaaaagtt
ggagctgagcttgataaggcaattgacaacaagaagactgggatacatgaatcaacttta
aaagaagagatggttaaggaggaaaaacattcatcaaagaaaatcaagggaaacacacta
tcctctgggtatgagatagagatatctgacaaaggcaaagacaaagaagaattagaggaa
ggacaagaggaatctgagctcaagaagtcatttactggggagatgaccgaagcggggaaa
tcaacctttcaagcagatgcggtaaagaaagacatatctaaaaggaaaaggcatccttca
agtaaaaccaacagaaaggccatctctactgcaaatgagattgagatgtctgatgaaggt
gaaagcagagaagaggcacagaagaacattggtgttcagaagaaagaggtgtcaaaggca
tatcctacaggtaagactctggctgcaagtaagaggaagaagcctgtggatgccgaaaag
gagaacaagccaataacagatgatgtcccaaatgtaaatatgtccaaacatgggaggacc
agtgaagccctgattagaagtaataaaatggttggtgaaactgatctaaacacatttcaa
gctggtggaagttgtaatattgtaaatcatgaaccagtgtggtttattctgagtggacat
catttacagaggaaagagttccagcaggttataaggcgtttgaagggaagacttatcaaa
gattctcaccactggtcataccaggctacacacttcattgtcccggaaccagttcgacga
acagaaaagttttttgctgctgcagcatctgggaggtggattctcaagactgattactta
actgatagtaatcaggcagggaagttcttgccagaagaaccttatgaatggtaccggagt
ggccttagtgaagatggcacaatcaatttagtggccccaaggaagtggcgcctcttaagg
aaaaggactggacatggagctttgtatggactgcgtgttatcatatatggagaatgcact
gcaccacctctggataccctgaaacgtgtcttgaaggctggagatggcactattctagca
acatcccctccatacacccgtttcctcaaatctggagttgattttgccattgttagtcct
ggcataccacgcgttgattcatgggtccaagagttcttaagacatgaaatcccttgtgtt
ttggctgattacttggtagagtatgtgtgcaagccgggatattccctcgagaggcatgtg
ctttacaatactcatgcttggtcagagaaatcatttgcaaatctgttagcccggtcagag
gaaaacattaaggccttgnntgacggggaggtgatgatgaattgtagtgataaagctggt
tccgaggggtgcggaattngatatgctattgctgtgatcccctcctttgaagatatcccg
gtggaaaactggttgtgttcaaagtgtagtgaagatgacggtaccagaattccaaagggt
accaagagaaggccctctttatcaaggatttaa
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