Macadamia integrifolia (macadamia nut): 122057346
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Entry
122057346 CDS
T07436
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122057346
Membrane trafficking [BR:
ming04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
122057346
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_VPS8
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
122057346
NCBI-ProteinID:
XP_042475349
LinkDB
All DBs
Position
12:complement(21208129..21247695)
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AA seq
1124 aa
AA seq
DB search
MYMAYGWPQVIPLEVGLCPASEHIVYLKIINRLLLVVAPTHLELWSCSQHKVRLGKYKRD
SDSIQREGENSQAVWSPDTKLIAVLTSSFFLHIFKVQNSEKRLQAGGRQPSGLFLATISL
LLSEEVPFSDRNLTMSNIVCDNKHVLLGLSNGSLHLISWKGEFCGSFRLHSHPLPRPVTE
PVHSLENGLSSEGPLVALTSNHNSTSSSAVIQLDLSLSLRLLVVLYSDGQVALCSMSKKG
LKQAESIEAETWLGSGDAVCASVAADQQILAIGTRRGVVELYDLAESSSLFRTVSLYDWG
YSVEDTGPVSCIEWTPDNSAFAIGWKLRGLTVWSVSGCRLMCTIRQIGISSVSSPMIKQN
QDFKYEPMMGGTSLLQWDEHGYRLYAIEAGSSERILSFSFGKCCLNRGVSGTTYSRQVIY
GEDRLLVVQSEDTDELKMLHLNLPVSYISQNWPVLHVVTSNDGMYLAVAGIHGLILYDIR
NKKWRVFGDITQEQKIQCKGLLWLGKIVVVCSYIDSSNTYELLFYPRYHLDQSSLLCRKS
LLGKPMVMDVFQDYLLVTYRPFDVHIFHVKISGDLSPSNTPTLELSTVRELSIMTAKSHP
AAMRFIPDQLPKECISKNLLSSSSDSLLSQPSRCLVLRTNGELSLLDLDDGRERELTDSV
ELFWVTCGQSDEKANLIEEVAWLDYGHRGMQVWYPSPGVDAFKQEDFLQLDPELEFDREV
YPLGLLSNAGIVVGVSQRMSFSASTEFPCFEPSPQAQTILHCLLRHLLQRDKKEEALRLA
RLSTEKPHFSHCLEWLLFTVFDAEISRKNANKNQNSVPKNTTSISLLEKTCDLIRNFPEY
LDVVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTGACYILVIAKLEGPAVSQY
CALRLLQATLDESLYELAGELVRFLLRSGREYEHATSDSDKLSPRFLGYFLFRPSYKKQS
LDTRSTSFKEQSAHVTSVKNILENHASYLMSGRELSKLVAFVKGTQFDLVEYLQRERYGS
ARLESFASGLELIGQKLQMSNLQSRLDAEFLLSHMCSVKFKEWIVILATLLRRSEVLFDL
FRHDMQLWKAYMTTLQSQPAFAEYYDLLNVLEEELSSLPRSEEK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggcttacggatggcctcaggtcatccctcttgaagttggcctttgtccagct
tcggagcatattgtttatctcaaaatcatcaatcgattgttactggttgtggctccaact
cacctcgaactatggagctgttctcagcacaaggtgaggttagggaagtacaagagagat
tcagattcaattcaaagggaaggggagaattctcaggcggtgtggagccctgatacaaaa
ttgatcgctgttcttacttcttcattctttcttcacatttttaaggtccagaattcagaa
aaaagactacaagctggaggaaggcaaccatctggtttatttcttgctaccatttctcta
ctgcttagtgaggaggtacccttttccgatagaaacttaacaatgagcaatattgtatgt
gacaataaacacgtactgcttggactttcaaatggatctttacatcttatatcctggaag
ggggagttttgtgggtcctttcgacttcattcccatccacttcccagaccagttacagaa
ccagtgcattctctggaaaatggtcttagttctgaagggccattagtagctttgacatct
aatcataattccaccagcagttctgctgttattcagctggatctttccttatcactgagg
ttactagttgtgttatattctgatgggcaagttgctttatgttctatgagtaagaaaggt
ttaaagcaagccgaatccattgaagctgaaacgtggttgggttcgggtgatgctgtctgc
gcctcagtagcagcagatcaacaaatccttgccattggtaccagaagaggtgttgttgag
ttatatgacctggcagaatcttcatccctttttcgcactgtatctttatatgactgggga
tattctgtagaagatactggtcctgtgagttgtatagaatggacacctgacaactctgca
tttgcaattggatggaaattgagaggacttacagtttggtctgtatctgggtgccgtttg
atgtgtacaatccgtcaaattggtataagttctgtatcttctccaatgattaaacaaaac
caggattttaaatatgaacctatgatgggtggcacctcactgttgcagtgggatgaacat
ggatataggctttatgctattgaggcagggtcttcagagaggattctttcattttctttt
ggaaaatgttgccttaacagaggagtttctgggacaacatacagtcgtcaagtgatttat
ggtgaagatcgattgcttgttgtgcagtctgaagatactgatgaacttaagatgttacat
ctaaaccttccagtttcttatatctcccaaaattggccagttttacatgttgtcactagc
aacgatggaatgtacttagctgttgctggcatccatgggttgatcttatatgatatacgt
aataaaaaatggcgtgtttttggagatattacccaggaacaaaaaatccagtgtaaagga
ttgttatggttggggaaaattgttgttgtttgtagttacattgattcttccaacacttac
gaattgcttttttatccaagatatcaccttgatcagagctctttactttgtcgcaaatcg
ttacttggcaagccaatggtcatggatgtctttcaagattatttgcttgtaacttaccgt
ccattcgatgtgcatattttccatgtgaagatttctggtgatttatcaccttctaatact
ccaactttagagctttctacagtacgagagctttcaatcatgactgcaaagagccatcct
gctgcgatgcgcttcattccagatcagcttccaaaagaatgcatctcgaagaaccttctt
tcatcttcatcagattccttacttagtcagccttctagatgcttggtattacgaactaat
ggggagctttcactacttgatttggatgacgggcgtgagcgggagctcacagattcagtt
gaattattttgggttacttgtggtcaatctgatgagaaagcaaacctcattgaggaagtt
gcttggttagattatggtcaccgaggaatgcaggtatggtatccatctcctggtgttgat
gcctttaagcaggaggatttcttgcagctggaccctgagctggaatttgatcgtgaggtc
taccctctagggcttctttcaaatgctgggattgtagtcggtgtttcccagagaatgtca
ttttcagcatccacagagttcccatgttttgagccttctcctcaagctcaaactattttg
cactgtctactgcgacaccttcttcagagagacaaaaaggaggaagctttacggttagca
cgtttatccactgaaaagcctcatttttcccactgtctggagtggctactttttactgta
tttgatgcggagatatcaaggaaaaatgcaaacaagaaccagaactcagttcctaaaaac
actacaagcatctctcttttggagaagacctgtgatttgatcagaaattttcctgaatat
cttgatgttgttgtaagtgtggctagaaaaactgatgggcgacattgggcagatttgttt
gctgctgccggcagatcaaccgaattgtttgaggagtgcttccagcggagatggtaccgc
actggagcttgctatatactagtgatcgccaaactggaaggacctgctgtgagtcaatac
tgtgctttgcgtttattgcaggcaacacttgatgaatctttatatgaacttgctggggag
ttggtgaggttcttgttgagatctggaagggaatatgaacatgcaacttctgattctgac
aaactgtctcccagatttttgggatatttccttttccgccccagttacaagaagcaatcc
ttggacacaagaagcacctcattcaaagagcagagtgcacatgttacctctgttaaaaat
atcttagaaaaccatgcaagctacctcatgtcaggaagagaactttccaagcttgttgca
tttgtaaagggcacgcagtttgatctagtggaatatcttcagcgggagcgttatggatct
gctcgcttggagagttttgcttcaggtcttgagctaattgggcaaaagcttcaaatgagc
aatttgcagagccgattagatgcagaattccttttgtcacatatgtgctctgtcaagttc
aaagaatggatagtcatcctggctactcttttaagacgttcggaggttctttttgatctt
ttccggcatgatatgcaattatggaaagcatacatgacaaccctacagtcacaacctgca
tttgctgaatattatgatctgctgaatgtgttggaagaagaactttcatctctgccaaga
tccgaggagaaataa
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