Macadamia integrifolia (macadamia nut): 122057747
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Entry
122057747 CDS
T07436
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122057747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122057747
Enzymes [BR:
ming01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122057747
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
HECT type E3
122057747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT
PDS5
Motif
Other DBs
NCBI-GeneID:
122057747
NCBI-ProteinID:
XP_042475912
LinkDB
All DBs
Position
12:6998395..7015072
Genome browser
AA seq
1606 aa
AA seq
DB search
MENRGRKRAELADQLRADKRACSSSEFRPGSSSSCIHAHTGTTNSASEAPECEMETSSSA
SASGRSEGEADRDSGYGSCDSDGLDDSEHRHRSFREYHPRRSSGDHAKFKRILSSLEDDA
EPGSQLASLTELCDLLSFCTEDSLSSFSSDAFAPVLVKLARHDNNPDIMLLAIRAITYLC
DVLPRSSGFLVRHDAVPALCSRLMAIEYLDVAEQCLQALEKISHDHPLACSQAGAIMAVL
NYIDFFSTSIQRVALSIVANICKKLPSDCSTPYMEAVPILCNLIQYEDPKLVENVAMCLI
RIVERVSHSPEILNDLCKHGVIHQATNLIALNSRTTLGQPIYSGLIGMLARLASGSVVAV
RTLFELNICTTLKHILSSYDIAHGLPYPVTGDAHSNQVHELLKLINELLPSSARSNEDIQ
LVSDKEKILMDRPEILRQFGIDILPVLIKVVNSGANLYVCYGCLSIINKYVYFSRSDMLL
DLVKNTNISSFLAGVFTRKDHHVLISALRIAETVLLKLPDVFLSSFVKEGVVYAIDALLT
PERSSQLMVPTSCGILIGSDQRLAAKDVLRCLCFAFDADCSSSSEKRDCKLEDDSVRILA
MHIKATYFLTESQNSEIGLTETLQKLRTFCALLTDNVSISIGNDVYAQQEENLYHILHQI
MAELSGREPMSTFEFIESGIVKSLVNYLSNGKYLEGKIDPHALSAHFHFVLKRLEMFARF
CLSSTGGVWEDTHLAVLIRKLQCAFSSVEKFPVILSHVSKPRNTYATVPSGRCTIHPCLR
VHFLKAEDESGLCNYPGDVLTVEPFSSLDAIEGFLWPKVSSGGGEHINLTSQSSTPSKIG
LPLPQHADARSHQVNIQSYMGKINDLESALPAMQVVAMLSEDMAELSHSSLEGERAGDVI
QAIPGDTSTSLNQACSGSTAQDVQYIPVEDASLRVQDSAIATTSNLASSDEHIQGRKYFT
SCSNGGSSPKLIFYIEGRQLDRSLTLYQAILRQQAKAEHDVIVGPRFWSEVYKVTYRKAA
EVQQSNPRVHGSKISSTLDRLGAFWQDVPFFSSMLISQLPCDLEKSNPCYDILFLLKILE
GLSRFAFHLMSGERIRAFAEGRINDLDELKVAVPAIPRTEFVNSKLTEKLEQQMRDPLAV
SIGGMPSWCSQLMAVCPFLFGFEARVKYFRLTAFGFSQDQSHPWSHSTNNNPNTPNDRRL
NGLTVPRKKFQVCRSHILDSAAQMMEQFARHKTIIEVEYNEEVGTGLGPTMEFYTLVSQE
FQKVGLGMWREDYNSSTSGKSLYIESSGLLVCPFGLFPRPWSDSSGTSDGIQFSEVIKKF
VLLGQVVAKALQEGRVLDLPLSKAFCKLILEQDLNIFDIQSFDPELGRTLLEFQALVDRK
KLFESVSANSTTIMSESCFRNTRIEELFLEFTLPGYPDYILASGPDHKMVNMDNLEEFIS
QTVDATVNSGIDKQIEAFKSGFNQVFPVKSLQVFTEEELERLLCGDQDAWASNELLDHIK
FDHGYTSSSPPIMNLLEIIQEFECNQRRAFLQFVTGAPRLPPGGLAALNPKLTIVRKHCG
EWADGDLPSVMTCANYLKLPPYSSKERMKERLLYAITEGQGSFHLS
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcggggtcgtaaacgagccgagcttgccgatcaattgcgagcagataagcgg
gcttgtagctcatcagagttcaggcctggctcttcgagttcatgtattcatgcccatacg
ggtaccacgaattctgcctctgaagcaccggaatgcgaaatggagacttcatcctctgct
tctgcatcagggcgatcagaaggagaagccgatagggattcaggatatgggtcttgtgat
tctgacggattggatgactctgaacatagacacagaagcttccgcgagtatcatcctcga
agatcttctggtgaccatgccaaattcaaaaggattctgtcaagcttagaggacgatgct
gaacctggtagccagctcgcgtccctcacggagctgtgcgatctcttatcattctgtact
gaggactctctatctagtttctcctctgacgccttcgctcctgttctggtcaagttagct
aggcacgataacaatccggatataatgctccttgctatccgggctattacttacctctgt
gatgtgttgccccgatcttctgggtttcttgtcagacatgatgcggttcctgctctttgt
tctcgactaatggcaattgagtatttggatgtagcagaacagtgtttacaagcactggaa
aagatctcccatgatcatccacttgcatgctctcaagctggggcaattatggctgtctta
aactatattgacttcttctctacaagcattcagagagttgcactttccattgttgcaaac
atatgcaagaaacttccatctgattgttctacaccttatatggaagcagttcctattctg
tgcaatcttatccaatatgaggacccaaagcttgttgaaaatgttgccatgtgcttgata
cgaatagtggagcgggtgagtcattcgcctgagatactgaacgatctctgcaagcatgga
gtgatacatcaagctacaaatcttattgctttaaacagcagaaccactctcggccaacca
atttactctggtttgattgggatgctcgctagacttgcctctggttcagttgtagctgtc
aggactctttttgagcttaatatatgcaccacactcaagcatattttgtctagttatgat
attgcacatggtttgccctatcctgttacgggtgatgcacattccaatcaggtacatgaa
cttctcaagttgataaatgagcttcttccttcttcagctagaagcaatgaagatattcag
ctagtttcagataaggagaagattttaatggacaggcctgaaattctgagacagtttggg
attgacatccttcctgtcttgatcaaggtggttaattctggtgcaaatttatatgtttgc
tatggctgcctttctattatcaacaagtatgtttatttcagcagatctgacatgcttctt
gacttggttaagaataccaacatttcaagttttttggctggtgtgtttacaagaaaggat
catcatgtattgatctctgctctaaggattgctgagactgtgctgttaaagcttcctgat
gttttcttgagttcttttgtaaaagagggtgttgtgtatgccattgatgcacttcttaca
cccgaaagaagttcgcagctcatggtaccaacgtcttgtggcatcttgattggatcagac
caaagattagctgcaaaggatgtacttagatgtttatgttttgctttcgatgctgactgc
tcttcctcttcagaaaagcgagactgcaagcttgaagatgattctgttcgcattctagca
atgcacataaaggccacctactttcttacagaatcacagaactctgagataggactgact
gaaactctgcagaaacttcgaactttttgtgcgttattaactgataatgtgagcatatcc
attggtaatgatgtctatgctcaacaagaagagaacttatatcatatattgcatcaaata
atggcagagcttagtggaagggaaccaatgtccacttttgagttcatagaaagtggaata
gtgaaatcacttgtaaattatttatccaatggcaagtatctagagggaaagatagatccc
catgccttatccgctcattttcattttgtgctaaagaggttggagatgtttgctaggttt
tgtctttcctctactggtggagtttgggaggacacacacctggcagttctaatacggaaa
ttgcagtgcgcattttcttctgtagaaaaatttcctgtaattctaagccatgtttccaag
ccaagaaacacctatgctactgttccaagtggtcgttgcaccatccatccttgtttaaga
gttcatttcctgaaggctgaggatgagtcaggcctgtgcaattaccctggagatgttcta
acagtcgaaccgttttcttctttagatgccattgagggttttctgtggcctaaagttagc
tcaggtggaggtgaacatatcaatttgacaagtcagtcctcgaccccttcaaaaattggt
ctgcctcttcctcaacatgctgatgcaagatctcatcaagtcaacattcaaagttacatg
gggaagattaatgacttggaatctgctttgcctgcgatgcaggttgttgccatgctctcg
gaagacatggctgaattgtcccattcttcactagaaggtgaaagagcaggtgacgtaata
caagctattccaggtgatacaagtacatccctgaaccaagcatgttccggctctacagct
caagacgtacaatacattccagttgaggatgccagcttgagagttcaagattcagctatt
gcaactacctccaatcttgcgtctagtgatgaacatatacaaggtagaaagtatttcaca
tcctgtagcaatggtggttcttccccaaaattgattttttacatagaaggaagacagctg
gaccggtcattgaccctctatcaagcaattctccgacaacaagcaaaggctgagcatgat
gtaattgtgggtccaagattctggagtgaagtatacaaagtaacatatagaaaagctgca
gaagtgcaacaatcaaatcctcgtgttcatggttctaaaatttcttccacgttggataga
ctaggagcattttggcaggatgttccatttttctccagcatgttgatttctcaacttcct
tgtgacttggagaaatcaaatccatgttatgatatattatttctgctcaaaattttggaa
ggcctgagcaggtttgcatttcatctaatgtctggtgaaagaattcgtgcctttgctgag
gggagaatcaatgatctggatgaattgaaggttgctgtacctgcaataccacggaccgag
ttcgtaaactctaagttaactgaaaaactggaacagcaaatgcgggacccgttagctgtg
tctattggtggaatgccttcatggtgtagccagttaatggctgtatgcccatttctattt
ggttttgaagcaagggttaaatacttccggttgacagcatttggtttctcacaagatcaa
tctcatccatggtcacactcgactaataataatccaaacaccccaaatgacaggcgattg
aatggtcttactgtgcctcgtaaaaagtttcaagtttgccgaagccacattttggactct
gctgcacagatgatggaacagtttgcccggcataaaactatcatcgaagtcgagtacaat
gaagaagttggcacagggctggggccaacaatggagttttataccctggttagtcaggag
ttccaaaaggttggtttgggtatgtggagagaagactacaattcttccacttcagggaaa
agcctatatattgaaagttctggattgttggtgtgtccttttgggctttttcctcgtcca
tggtcagattcatcaggtacctcagatgggatacagttctctgaagtgataaaaaagttt
gtccttcttggacaggttgtagcaaaggctcttcaggaaggaagggtcctagatcttccc
ttatctaaagccttctgtaaactcattcttgaacaggatctcaatatatttgacatccag
tcatttgatcctgagcttggaagaaccttgctagagtttcaggctcttgttgataggaag
aaattatttgaatctgtttctgcgaattccactacaattatgtcagaatcatgtttccga
aatacccgaatagaggaactcttccttgagtttactcttcctggctatcctgattatatt
ctagcctcgggacctgatcacaaaatggtaaatatggataacttggaagaatttatttca
caaacggtggatgcaactgtaaatagtggaattgacaaacaaattgaagcttttaaatca
ggatttaaccaggtgttccctgttaagagtctccaggttttcactgaagaggagcttgaa
cgtttgttatgtggtgatcaggatgcttgggcttccaatgagctcttagatcacatcaag
ttcgatcatggctacacatctagcagtcctcccatcatgaatttattggaaattattcaa
gaatttgaatgcaatcagcggcgagcgttccttcagtttgttactggtgcacctcgtctc
ccgccaggaggcttagcagctttaaacccgaaactgacaattgttcgcaagcattgtggt
gagtgggctgatggtgacttgccaagtgtgatgacatgtgctaactacctgaaacttccg
ccttactcttcgaaggaaaggatgaaggagaggttattatatgctataacagaaggacag
ggatccttccatctctcttga
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integrated database retrieval system
