Macadamia integrifolia (macadamia nut): 122057752
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Entry
122057752 CDS
T07436
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122057752
03015 mRNA surveillance pathway
122057752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122057752
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122057752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_occluded
YHR127W_C
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
122057752
NCBI-ProteinID:
XP_042475926
LinkDB
All DBs
Position
12:29244304..29262413
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AA seq
407 aa
AA seq
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MAKPGRGRPATPSGSDSGSSSRSRSRSTSGSDSRSRSLSRSRSRSLSSSSSPSRSVSSRS
RSPPPQRKSPAVAARRRPSPPPAKRASPPPRKASPVLESVVLHIDKLTRNVNEGHLKEIF
SNFGEVVNVELIMDRIVNLPRGYGYVEFKTRADAEKAQLYMDGAQIDGNVVQARFTLPPR
QKVSSPPKAIPASQKREAPQKDNVGADIEKDGQRQREPSPRRKPLSPPRRRSPVSHRRRP
ESPPRRRVESPVRRRGESPYRRGETTPRRRPASPVRRRSPSPLPRRHRSPARTSPRRIRG
SPVRKRSPVPLRRRSPPRRARSPPRRSPIRRRSRSPVRRPARSRSRSVSPRRGRALAQRR
GKSSSYSGSPSPRKGARKISRSRSPRRPGRGRSSSNSRSSSSPPAKP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctggtcgtggtcgtccggccacgccttcgggctcggactcgggttcgtct
tctcggtcccgctctcgctcgacttctggttcagattcacgttctcgttcgctgtcccgt
tctcggtctcgctccctctcttcctcttcctctccttctcggagtgtcagttctcgcagc
agatctcctccacctcagagaaaaagtcctgcagttgcagccaggcgtcggccttctcct
ccaccagctaaacgggcttcacctccaccaaggaaagcatctccagttcttgagtctgtc
gttctgcacattgacaagcttaccaggaatgtgaatgaaggacatttaaaagaaatattc
agtaactttggtgaagtagttaatgtggaattgattatggatcgtattgttaatcttcct
cgtggatatggctatgtggagttcaagacgagggctgatgcagaaaaagcgcaactttac
atggatggtgctcaaattgatgggaatgttgttcaagcaagattcaccttacctccacgc
cagaaagtgtcatcccctccaaaggctattcctgcctctcagaaaagagaagctccccaa
aaggataatgttggtgctgatattgaaaaggatgggcagcgccagagagaaccttctcca
cgtcgtaaacctctttcaccaccacgaaggagatcccctgtatcacatcgaaggcggcca
gaatctcctccacgacgacgtgtagagtcccctgttcgtcgccgaggggaatctccgtat
cgtcgtggtgaaacgactcccagaaggaggccagcatctcctgttagaagacgttctccg
tcacctcttccaaggcggcacaggtctcctgcacgaacttctccccgaagaatacgtggt
agtccagtccgcaagcgatcccctgtcccgctgaggcgacgttctcctcctagacgagca
cgtagtcctcctagaaggtcaccaatccgtcggcgtagccgctctcctgttcgtaggcct
gctcggtcacgttcaagatcagtctctcctcgcaggggccgagcattggctcaaagacgt
ggaaaatcttcatcgtattctggatcacccagtcctcgcaagggagcgaggaaaatttca
agaagtcgtagcccaagaaggcctggccgaggaagaagcagtagtaatagccgcagcagc
agttccccgcctgcaaaaccataa
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