Macadamia integrifolia (macadamia nut): 122057835
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Entry
122057835 CDS
T07436
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122057835
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ming01009
]
122057835
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122057835
Protein phosphatases and associated proteins [BR:
ming01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122057835
Spliceosome [BR:
ming03041
]
Common components
Common spliceosomal components
SR proteins
122057835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
OB_RNB
Motif
Other DBs
NCBI-GeneID:
122057835
NCBI-ProteinID:
XP_042476077
LinkDB
All DBs
Position
12:21516467..21530146
Genome browser
AA seq
230 aa
AA seq
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MSYSREGRSPSPSRSRSPPRGRRSRSRSRSRDRSRSRSRDSEDAGNPGNNLYVTGLSTRV
TTSDLEKYFNREGKVMMGVDFSTFDNWWVKIFLFQHYKVLECHLVSDPRTRESRGFAFVT
METVEDADRCIKHLNRSVLEGRLITVQKAKRKRGRTPTPGRYHGLKDKRGRDRRRSRSYS
PHRRQERDHWRDRRERSRSPYGRRGEEYDSHKRRRDRSLSAGSERNPRAG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcatattctagagaaggaaggtccccgtctccctcccgctccagatctccccctagg
ggtcgcaggtcaagatcacggtcaaggtcaagggacaggagtcgctctaggagccgagat
tctgaagatgcaggaaatcctggaaacaacttgtatgtaacaggcttatcaacaagggtc
acgaccagtgatcttgagaaatattttaatcgtgaaggaaaggtgatgatgggtgtggac
ttttccacctttgataattggtgggtgaagatttttctattccaacattataaggtcctg
gaatgccatctggtttctgatcctcgtacaagggaatctcggggatttgcatttgttaca
atggaaaccgttgaggatgcagaccgctgcatcaaacatctaaaccggtctgtgcttgaa
ggtcgactaatcactgtccaaaaggcaaaaaggaagcgtgggaggacaccgacaccgggc
cgataccatggtttgaaggacaaaagaggacgtgatcgcagacggtctcgtagctactcc
ccacatagacgccaagaaagagatcattggagggatcgtagagaaagatctcgctcccca
tatgggaggaggggtgaggagtatgactcgcacaagaggcgcagggaccgttccttgtca
gctggtagtgagagaaatcctagagcaggttaa
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