Macadamia integrifolia (macadamia nut): 122057858
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Entry
122057858 CDS
T07436
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122057858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ming03032
]
122057858
03400 DNA repair and recombination proteins [BR:
ming03400
]
122057858
DNA replication proteins [BR:
ming03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122057858
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122057858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
BRCT_3
TopBP1_BRCT0
ECT2_BRCT0
Mucin-like
BmKX
Motif
Other DBs
NCBI-GeneID:
122057858
NCBI-ProteinID:
XP_042476120
LinkDB
All DBs
Position
12:complement(1579777..1604338)
Genome browser
AA seq
993 aa
AA seq
DB search
MADRKKLMPKVFKGVNVFMSRKLVPPEIFDTLHDALKQNGAEVNLCCDPSRTGPNDYHII
SSPEHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCCLAMDGVKVLASGFEKDEK
VKIEKLVTAMGGVLQTKASMDVNFVIARNVLAAKYKWASNVLKKPVVTISWLNQCWNEHR
VVPQEPYRVPPFSGLTICTTRIPADERKELEKLVIQNGGKYSADLTKNCTHLVADTPEGD
KYKVARKWGHIHIVTRKWVNQSIAKRACLGEESYPIQGVPNSSSNAMKSSLKRQHDPEKC
NGNSQTEPSSVIGNSNMLPSSMIADPDLETSLSQNMSSTFSDATIFTKEEGNGEPRLQPE
HGTNFDGCVADDSQAEDSDLYLSECRISLVGFQTSEMRKLVHMVRKGGGSRYMSFNEKLT
HIVVGTPSESEKKEVRAYAAFGVIYVVRPSWLEDCVREKREVPVSLRHVASDLLLPRAAA
VGTSALKQGKSSAASFSLPAVKLVGNVDFESGISLENNRGQKPETNIKGSNYVKPATRSF
QKSMFSVLKDDSKVSQKLRQDSDAANVQNGKSSNVFKGKIFRFSSSFPQDRRDEIVEWVK
QGGGALVDDQVKNVHFTIECHGLIQTPADNSQAIIVSSHWIRSCLEDGCMLEVDRHILYS
PLPCRIPLPGFDGFCFCVSQYEEKDRLLLRNLCFVLGAKFTEKLSRKVTHLICKFTSGPK
YEAACKWGIEAVTFEWICECIMQDKIVALDQFLPKEATAQDREGGLCTMSQYPTQAACMI
SRGVSFQLPSQSQVMTKIETNVVCSRSESFSEGAKHSSLSIKRPRLVDDDSQTDFFSSEI
HQDGSLCKIESMRNRVSEDGGEISHAVPDVAAAIEDLLAQTSKIQDMKLPGGSLCDQSLF
STNHSILGQEHLEPRSTFGISNSWLNRTWTNDFDFIFRNEKQDNLCTPGQGVKEGTYDGF
SETQTESQVVGYEEDLSGRQMIIDRVRTRSSMT
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaagaagctgatgccgaaggtgttcaaaggagtgaacgtcttcatgtct
cggaagctcgtcccgcctgaaatcttcgatactcttcacgatgccctcaagcagaacggt
gccgaggttaatctctgctgcgatccatcgcgaaccggtcctaacgattaccatatcatc
tcctctcccgaacatgagaaattcgaggatcttagagccaagggctgtaatttacttggt
cctcaatgtgttctttcctgcgcaaaagaaaacagagctttgcctaaacaaggttttact
tgttgccttgcaatggatggggttaaagtgctggcttctggatttgagaaggacgaaaag
gttaagattgaaaagttagtgactgcaatgggaggagtcttgcaaactaaggcctccatg
gatgttaactttgtcattgcgaggaatgttttggctgcaaagtacaagtgggcctcaaat
gttcttaagaaaccagttgtcaccattagctggttgaatcagtgctggaatgaacaccga
gttgtgcctcaggagccatacagagttcctcctttttctgggttgaccatttgtacaaca
agaattccagcagatgagcggaaggagcttgaaaagcttgtcatacagaatggtgggaaa
tactctgctgacctaaccaagaattgcacacatttggttgctgatactcccgaaggtgac
aaatacaaggttgccagaaaatggggtcacatccatattgtgactcggaaatgggttaat
cagtctattgctaaaagagcatgtcttggtgaggagtcttaccctattcagggagttcct
aattcttcaagtaatgccatgaagagtagtctaaagagacagcatgacccagagaagtgc
aatggaaattctcaaactgagccatcatctgtgattggaaattcaaatatgcttccatct
tccatgattgctgatcctgatctggaaaccagtctttctcagaatatgtcttctacattt
tctgatgccactatatttaccaaagaggaggggaatggagaacctagattgcagcctgaa
catggaacaaactttgatggctgtgttgctgatgattcacaagctgaagatagtgatttg
tacttgtcagaatgcagaatttcacttgttgggttccagacctctgaaatgcgtaaacta
gtccatatggtgcgtaaaggtgggggctcccggtatatgtcattcaatgagaagttgacg
cacatagttgtgggaacaccttcagagagcgaaaagaaggaggtaagggcctatgcagct
tttggtgttatttatgtggtaagacccagctggttggaagattgcgtccgagaaaaaaga
gaagtacctgtgtccctgaggcatgttgcttctgatttacttttaccaagagctgcagca
gtaggaacttctgctctaaagcaagggaaaagctccgctgcatctttcagtctgccagct
gttaagctagtggggaatgttgactttgaatctggtatctcattggagaataacagagga
caaaagccagaaacaaatataaaggggtccaattatgtaaaaccagctacaagatcattc
cagaaaagcatgttttctgttttaaaggatgacagtaaggtttcccagaaattacgacaa
gattctgatgctgcaaatgttcaaaatgggaaatcatcaaatgttttcaaagggaaaata
tttcgcttttcaagttcttttcctcaagataggagagatgaaatcgtggaatgggttaaa
caaggaggaggagctttggtggatgatcaggttaagaatgtgcacttcaccattgagtgt
catggtctgattcagactcctgctgataattctcaagccatcattgtttctagtcactgg
attagatcctgtttggaggacggatgcatgctggaagttgaccgtcacattctgtattca
ccacttccctgtcgtattccattacctgggttcgatggcttttgcttctgtgtctctcag
tatgaagagaaagataggttgttattaagaaatctttgttttgtgctaggagctaaattc
acagaaaaactgagtaggaaggttacacatttaatttgcaagttcaccagtggcccaaaa
tatgaggctgcttgcaaatggggcatagaagcagttactttcgagtggatctgtgaatgc
atcatgcaggataagattgttgctctggatcaatttctcccaaaagaagctactgctcaa
gaccgagagggaggactatgcacaatgagccagtatcctacacaggcagcttgcatgata
tctagaggtgtttcatttcagttaccgagtcaatctcaagtcatgacgaaaatagaaact
aatgttgtttgcagtagaagtgaaagcttcagtgaaggggcaaaacattcttccctctct
attaaaagaccaaggcttgtggatgacgacagccagacagattttttttcttctgaaatt
catcaagatggttctctttgcaaaattgaatccatgagaaacagggtatcagaagatggt
ggagaaatttctcatgctgttccagatgtggctgcagctattgaagacttgttagcacaa
acgagtaagattcaagacatgaagttaccaggcggttctctatgtgatcaaagtcttttc
tcaaccaatcattcaattcttggtcaagagcatttagagcctcgttctacctttgggatt
tctaacagctggttgaacaggacctggacaaatgattttgacttcatcttcaggaatgaa
aaacaagataacctttgcactcctggacaaggtgtaaaagaaggcacttatgatggtttc
agtgaaacacagacagaatcacaggttgtagggtatgaagaagatttgtcaggcagacaa
atgataattgatagagttcgtactcgaagtagcatgacttaa
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