KEGG T07436: 122058136

Macadamia integrifolia (macadamia nut): 122058136

Entry

122058136         CDS       T07436

Name

(RefSeq) exosome complex component RRP41-like isoform X1

K12587

exosome complex component MTR3

Organism

ming Macadamia integrifolia (macadamia nut)

Pathway

ming03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:ming00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122058136
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ming03019]
    122058136
Messenger RNA biogenesis [BR:ming03019]
Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     122058136

SSDB

Motif

Pfam:

RNase_PH RNase_PH_C

Other DBs

NCBI-GeneID:

122058136

NCBI-ProteinID:

XP_042476578

LinkDB

Position

12:9475975..9486213

AA seq 254 aa
MAGKAATAPSTYAPSPTQKARQRIFKDVDWVRPDGRGFQQCRPAFLKTGAVNSASGSAYA
EFGNTKVIVSVFGPRESKKAMLYSDVGRLNCNVSYTTFANPVRGQGSDHKEFSSMLHKAL
EGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVTSVSVSCLGK
NLVIDPISEEESFQDGSLMIACLPSRNEVTQLTLTGEWSTPKIHEAVELCLDACSKLGEI
MRSCLKEAAPMSKE

NT seq 765 nt +upstreamnt +downstreamnt
atggccgggaaggctgcaacggctccatcgacgtatgcgccgtctccgactcagaaagca
agacaacgcatcttcaaagatgtcgactgggttcgtccagatggtcgaggctttcaacag
tgcagaccggcctttttgaagactggtgctgtaaattctgcttctggatctgcttatgct
gagttcgggaataccaaggtcattgtctctgtatttggtccgagggaaagtaaaaaagca
atgctgtacagtgatgtgggcaggctcaattgtaatgtcagctatacgacttttgccaat
ccagttcgtgggcagggatcagaccacaaagaattttcgtccatgcttcataaagcattg
gagggtgctataatactggaaactttcccaaagacaactgtggatgtttttgcattggta
ttggaatctggtggaagtgatcttccagtcgtgatatcatgcgcaagtcttgctcttgca
gatgcagggattatgatgtatgacctggttacatcagtttctgtgtcatgtcttgggaaa
aatcttgtcatcgatcccatatcagaagaggaaagttttcaagatggaagcctaatgatt
gcatgtttgccctctcgtaatgaggtcactcagcttaccctcactggagaatggtcaacc
ccaaagattcacgaggctgtggagctttgccttgatgcttgctcaaagcttggggagata
atgagatcatgtttaaaagaagctgcacctatgtcaaaggaatag

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