Macadamia integrifolia (macadamia nut): 122058161
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Entry
122058161 CDS
T07436
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122058161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122058161
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122058161
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_14
Motif
Other DBs
NCBI-GeneID:
122058161
NCBI-ProteinID:
XP_042476619
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Position
12:complement(27448306..27452165)
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AA seq
581 aa
AA seq
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MAYLFPEEVLEHVFSFIHSYKDRNAISLVCKSWYEIERWCRRRIFIGNCYAVSPGITIRR
FPELRSVSLKGKPHFADYNLVPHGWGANMYPWVVAMAQAYPWLEELRLKRMVVTDDTLEL
ISHSFKNFKVLVLSSCEGFTTYGLAAIAANCRNLRELDLLETEVNDVSGNWLSHFPESCT
SLVSLNFACLEGEVSFSALERLVGRCTNLRTLRLNQAVPLDKLANLLCRAPQLVDLGTGI
YSAEVRPELYSKLASAFAGCKELKSLSGLWEVVPAYLPAIYPVCSGLTSLNLSYATIQSM
DLIKLVSQCQNLQRLLVLDYIEDSGLGALAASCKDLRELRVFPSDPYGVEQNVSLTEQGL
VSVSEGCPKLHSVLYFCRQMSNAALFTIARNRPNMTRFRLCILEPHTPDYLTLQPLDAGF
GAIVEHCKDLRRLSLSGLLTDRVFEYIGTHAKKLQMLSVAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKAFLANASKLETMRSLWMSSCSVSFGACKLLGQKKQRLNVEVIDERGPP
DSRADDSPVERLYAYRSVAGPRLDRPNFVWTIDENSPMRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatttgtttcctgaagaggttctggagcatgttttctcgtttattcattcttac
aaggatagaaatgctatttctcttgtctgcaagtcttggtacgagatcgaacgatggtgt
aggcgtcggatctttatcggtaactgttatgccgtgagtccggggattaccatcaggaga
tttccagagctacgatctgtgtcattgaaagggaaacctcattttgctgattataatctg
gttccacatggatggggagctaatatgtacccttgggttgtggctatggctcaagcttat
ccttggttggaggagctgaggctgaagcgtatggtggtaacggatgatactttggaactg
atttctcattcgtttaagaactttaaggttttggttctctcatcctgtgagggtttcact
acttacggactcgccgccattgctgccaattgcaggaatctgagagagttagacttgctg
gagactgaagtgaatgatgtgagtggaaattggctcagccatttccctgagtcatgtact
tcactggtttcccttaactttgcatgcctggagggggaggtgagcttctctgccctggaa
cgtctggtgggaaggtgcaccaacttgaggacccttaggctaaaccaagctgtgcctctt
gacaagcttgccaacctcctctgccgggcccctcagctggttgatctaggtacagggatc
tactcagctgaggtccgccccgaattatactcaaagctcgcaagtgcctttgcaggctgc
aaggagcttaaaagcctctctgggttatgggaggtggtccctgcttatcttccagctatc
taccctgtttgtagtggactcacatcgttgaacttgagctatgctactatccaaagcatg
gatcttatcaagcttgttagccagtgtcagaatctgcagcggttgttggtactggattac
atcgaagatagtggccttggtgctcttgcagcatcttgcaaggacctgcgggaactgaga
gtatttccttcagacccgtatggtgtagagcagaatgtctcactaacagaacagggtctt
gtctctgtttctgagggctgccccaagcttcattcagtgctctacttctgccgccaaatg
tccaacgctgccttatttaccattgctagaaaccgtcccaacatgactcgtttccgtcta
tgcattcttgagcctcatacacctgattaccttaccctacagccccttgatgcgggcttc
ggtgctattgtggagcactgcaaggatctcaggcgcctttccctctctggtctcctcaca
gatcgagtatttgagtacattggcactcatgctaagaagcttcagatgctgtcagtggcc
ttcgctggggatagtgacttgggactccatcatgtgctgtccgggtgtgagagcctccgg
aagctagagatccgggactgcccctttggtgacaaagctttcttggccaatgcatcaaag
ctggagacaatgcgatccctttggatgtcttcatgctctgttagttttggagcttgtaag
ctattgggtcagaagaagcaaaggctcaatgtggaggttattgacgagaggggaccaccg
gattctagggcagatgacagtcctgttgaaaggctttatgcctaccgatcagttgcaggg
cctagattagacaggccaaactttgtttggacaattgatgagaactctcccatgaggctt
tcttag
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