Macadamia integrifolia (macadamia nut): 122059348
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Entry
122059348 CDS
T07436
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122059348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122059348
Membrane trafficking [BR:
ming04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
122059348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
122059348
NCBI-ProteinID:
XP_042478014
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Position
13:173661..199238
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AA seq
792 aa
AA seq
DB search
MIADGVEDEEKWLAEGIAGFQQNAFYMHRALDSNNLRDALKYCAQMLSELRTSRLSPHKY
YDLYMRAFDELRKLEMFMKEETKRGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGVQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQHQGPVREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RILEQVVNCKDELAQYYLMDCVIQVFPDEYHLQTLETLLGACPQLQPNVDIKTVLSGLMD
RLSNYAVSSAEVLPEFLQVEAFAKLSNAIGKVIEAQVDMPVVGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVTKLTGKPRLEDSTATKQVVALLSAPLEKYNDIVTALKLSNYPRVMD
HLDNATNKVMAVVIIQSIMKNNTYISTADKVEALFELIKGLIKDLDGSPVEELDEEDFKE
EQNSVAHLIHMLYNDDPEEMLKIICTVRTHILAGGPKRLPFTVPPLIFSALKLVRRLQGQ
EGEVAGEDEPATPKKIFQLLHQTIEALLSVPAPELALRLYLQCAEATNDCDLEPISYEFF
TQAFILYEEEVADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDEQEGVKDGERVLLCLKRALRIANAAQQQMANVTRGSSSSGLVTLFIE
ILNKYLYFFEKGNPQISSAAIQGLIELITTEMQSDTTSDPSAEAFFASTLRYIQFQKQKG
GAMGEKYEPIKV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggagtggaagacgaagagaaatggctggcagaagggatcgccggcttc
caacaaaacgctttctatatgcatcgagctttggattcgaacaatctcagagacgctctc
aagtattgcgctcagatgctatccgagcttcggacttcccggctttcccctcacaaatac
tacgacctctatatgcgggcgttcgatgagttgaggaaattggagatgttcatgaaggag
gagacaaagcgtggttgctctgtaatcgatctctacgagcttgtacagcatgctggaaac
atactacctagactgtatctcttgtgcacggtagggtccgtatacatcaaatcaaaggag
gctcctgctaaggatattcttaaagaccttgtggaaatgtgtcgtggtgttcaacatcct
gtacgtggcctttttctcaggagttacctttctcaagtcagtagggataagttgcctgat
attggctctgagtatgagggtgatgccgacactgtcatggatgccgtcgagtttgtactt
caaaactttacggagatgaataagctttgggtccgaatgcagcaccagggacctgtccgg
gaaaaagagaaacgggaaaaggagaggagcgagcttcgtgatcttgttggcaaaaatcta
catgtcctcagtcagatagagggcgttgaccttgatatgtacaaagatactgtgcttccg
agaattttggagcaggtagttaattgtaaggacgagcttgcccaatattacttgatggat
tgtgtaatccaagtctttccagatgaataccatttgcagactcttgagacattgttgggt
gcttgcccccagctgcagccgaacgttgatatcaagacagtgttatcaggactgatggat
agattatcaaactatgctgtttcaagtgccgaagtattgcctgaattcttgcaggtagaa
gctttcgcaaaattgagcaatgccattgggaaggtgatagaagcacaggttgatatgcct
gttgttggagctataactctgtatgtatctcttctgacattcactcttcgtgtccatcct
gatcggcttgattatgtggaccaagtgctgggagcttgtgttacgaaacttactggaaaa
ccaagactggaagatagcacagcaacaaagcaagtcgttgcacttctgagtgctcctttg
gagaaatacaatgatattgtgactgctctgaagctttcaaactatccgcgagtgatggat
caccttgacaatgctacaaataaagtcatggcagtggttattattcaaagcatcatgaaa
aataacacttacatttcgactgctgataaggttgaggcattgtttgaacttataaagggg
cttataaaggatttggatgggtctcctgttgaagagcttgatgaagaggatttcaaggag
gagcaaaattctgtagctcatcttattcacatgctctataatgatgatcctgaggagatg
ttaaagattatatgtactgtgaggacacatattctggctggaggacctaaacgacttcct
ttcactgttcctcctctaattttttctgctcttaagttggtcaggcgattgcaaggtcag
gagggtgaagtagctggagaagatgaacctgcaactccgaagaaaatttttcagcttttg
catcagactattgaggctttgttatctgttccagcacctgaacttgcactgagattgtac
ttgcagtgcgctgaggctaccaatgactgtgatcttgaacccatttcatatgagtttttc
acccaagcattcatcttgtatgaagaagaagttgcggattcaaaagcacaagttactgca
attcacctaataatagggactcttcagaggatgaatgtatttggtgttgagaacagggat
acactcacacataaggccactgggtattcggcaaaacttttaaagaaacctgatcagtgc
agagcagtttatgcatgttcgcatctcttctgggtagatgaacaggagggtgtcaaggat
ggagaaagggtcctgctatgcctaaagcgtgcattaaggattgcaaatgctgctcaacaa
cagatggccaatgtgacaaggggtagcagtagcagtggactagtcacactcttcatcgaa
atactgaacaagtatctttatttctttgagaaggggaaccctcagatcagtagtgcagca
attcagggccttattgaactaatcacgacagagatgcaaagtgatacgacatcagatcca
tctgcagaagcattttttgccagcacattgcgctacattcagttccagaaacagaaaggt
ggtgcaatgggtgaaaaatatgagcccatcaaggtctga
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