Macadamia integrifolia (macadamia nut): 122059670
Help
Entry
122059670 CDS
T07436
Name
(RefSeq) ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ming03009
]
122059670
Enzymes [BR:
ming01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
122059670
Ribosome biogenesis [BR:
ming03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
122059670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
TPR_PATROL1
Motif
Other DBs
NCBI-GeneID:
122059670
NCBI-ProteinID:
XP_042478554
LinkDB
All DBs
Position
13:12312990..12360597
Genome browser
AA seq
458 aa
AA seq
DB search
MATTRNLFLLYLGRPSCSCLSSSSLSLSRAMSTFHFNSIPTYPGLARCNTGKSFNSARSI
THEKNKKEKKCSKKSDDSNKSKKRDDSGWSAVAESFVKRRTRSDREFMWEHVQRYGSSCT
HIPVMLGDVLEVFAPHPHRPPLHSFVDCTVGAAGHSSAIIHAHSEMQLFVGLDVDPLAHE
KAHTQIYALLNEDCNLASNLNVYTFLKNFKDIKSVLCDVDEKLLIHGVDGFLMDLGISSM
QVNNAERGFGVLSDGPLDMRMNPQASLKAEDILNFWPEAEVGRILREYGEESNWQRLQKK
IVNARLYGGLHSTGELVDLIQKTFPASGGRKGWIKTATRVFQALRIAVNNELQTLEDALY
ACFDCLSSGGRLVVISFHSLEDRIVKQTFLDIIDNKGEEIDGNTRKGKDDIAEESWIKQK
IKGRKGTILTKRPITPSEEEERLNRRCRSAKLRVIQKV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacgagaaacctcttcttattgtacttgggccgccccagctgcagctgctta
tcgtcatcatcattatcactatcaagagcaatgtcgacattccacttcaattcgattcct
acttacccaggcctcgctcgatgtaacactgggaagtcatttaattccgctcgcagcatc
acccatgagaagaataagaaggagaagaagtgcagtaagaagagtgacgactcaaataag
agtaagaagcgagatgattcgggatggtctgccgttgcggagtcgtttgtgaagaggagg
acccgttctgacagggaattcatgtgggagcatgtccagcgctacggcagtagctgcact
cacatccccgtaatgctgggagacgtcttagaggtgtttgctcctcacccccatcgacca
cccctccactctttcgttgactgtactgttggagcggcaggacactcttctgcgataatt
catgcccattcagaaatgcagctatttgttggattggatgttgatcccttggcacatgaa
aaggctcacactcagatctatgctctcttgaatgaggattgcaacttagcttcaaacttg
aatgtgtacacctttttgaaaaatttcaaggatatcaaatctgttctctgtgatgttgat
gagaagctcttgatccatggagttgatggtttcttaatggacttgggaatctcatctatg
caggtgaacaatgctgaaagagggttcggtgttctcagtgatgggcctcttgatatgcgg
atgaatcctcaggcgagtttgaaagcagaagacatcttgaatttttggccagaggctgaa
gttggacgaattttacgtgagtatggggaggaaagcaactggcagcgtcttcagaagaaa
attgttaatgcgcgtttatatggaggattgcattccactggcgaactagtggacctaatt
cagaaaaccttccctgcatctggagggaggaaaggctggataaagacagcaacgagggtg
ttccaagctttgaggatagcagttaacaatgaactccagacattggaggatgccctttat
gcttgttttgactgtctttcctctgggggtagacttgttgtaatatctttccatagcttg
gaggacaggattgtaaaacaaacatttcttgacatcattgacaataagggtgaggagatt
gatggaaatacaaggaagggaaaggatgacattgctgaagaatcgtggattaaacagaaa
ataaaaggcaggaaaggcaccattcttacgaagagaccaataacaccttctgaagaggaa
gaaaggttgaatcgtcggtgtaggagtgcgaagctcagagtaattcagaaggtttga
DBGET
integrated database retrieval system
