Macadamia integrifolia (macadamia nut): 122060146
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Entry
122060146 CDS
T07436
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03020
RNA polymerase
ming03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122060146
09124 Replication and repair
03420 Nucleotide excision repair
122060146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122060146
03400 DNA repair and recombination proteins [BR:
ming03400
]
122060146
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122060146
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122060146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF5118
Motif
Other DBs
NCBI-GeneID:
122060146
NCBI-ProteinID:
XP_042479260
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All DBs
Position
13:9822748..9827681
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AA seq
316 aa
AA seq
DB search
MAQISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTIAIDLVEIEMNSS
VLNDEFIAHRLGLIPLTSSRAMGMRFSRDCDSCDGDGQCEFCSVEFHLHVRCDSDQTLDV
TSHDLVSSDPSVVPVDVVERSDSSDQRGITIVKLRQGQELRLRAIARKGIGKDHAKWSPA
ATVTFMYEPDIHINEDLMETLTLDEKREWIESSPTKVFGLDPDTQQVVVIDPEAYAYDDE
VIKKAEAMGKPGMIEIYAKEDSFLFTVESTGAIKASQLFINAIEVFKQKLDAARLSGDTE
EADDQFGELGAHMRGG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatatcgtaccaacgattccccaaggtgaagataagggagatgaaggatgac
taccttaagtttgagcttcgcgagacagatgctagcatggcaaatgcccttcgccgtgtg
atgctagcagaggtccccacaattgcaattgacctggttgagattgagatgaattcatca
gtgctcaatgatgagttcattgcccaccgacttggtctcatccctctgactagtagccgt
gctatgggcatgcggttctcccgagactgtgattcctgtgatggtgatggccaatgtgag
ttctgctctgttgagttccacctccatgttcgctgtgattcagaccagacccttgatgtc
accagccatgaccttgtcagttctgatccctctgttgtgcctgttgatgttgtggagcgc
tccgattcttctgatcagaggggaataacaattgtgaagttacgtcaaggacaagaacta
agattgagagcaatagcccggaaaggaattggaaaagaccacgcaaaatggtcacctgct
gcaacagttacttttatgtatgaaccagatattcatatcaatgaagatttgatggaaaca
ttgacacttgatgagaaaagagagtggattgaaagtagccctacaaaagtttttggcctt
gatcctgatacccaacaggtggttgtgattgaccctgaggcatacgcgtacgatgatgaa
gtgatcaagaaggcagaagccatggggaagcccgggatgatagaaatttatgcaaaagaa
gacagtttcctttttacagttgaatctactggtgccatcaaagcttctcagttgtttatc
aatgcaatagaagtttttaagcaaaagttggatgcggctcgcttgtcgggggacactgaa
gaagctgatgaccagtttggtgaattgggtgcgcacatgagagggggatga
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integrated database retrieval system
