Macadamia integrifolia (macadamia nut): 122060327
Help
Entry
122060327 CDS
T07436
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122060327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122060327
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122060327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
Iml2-TPR_39
TPR_16
TPR_2
DUF1993
Motif
Other DBs
NCBI-GeneID:
122060327
NCBI-ProteinID:
XP_042479398
LinkDB
All DBs
Position
2:complement(27398374..27460873)
Genome browser
AA seq
783 aa
AA seq
DB search
MAEGRRNLMQDGSGDETEKATDNLSVDKYNVEAAEILANEALHLPISEAAPIYEQLLSTF
PTAAKFWKQYVEAHMVVNNDDAVKQIFSRCLLNCLQIPLWRCYIRFIRKVNERKGAENQE
ETRKAFDFMLSYVGTDIASGPVWMEYITFLKSLPATTGQEESQRMTAVRKAYQKAIVTPT
HHVEQLWKDYENFENSVSRALAKGLLSEYQPKYNSAKAVYRERKKYIEEIDWNMLAVPPT
GSCKEEQQWMVWKKLLAFEKGNPQRIDSASSNRRIAFTYEQCLMYLYHYPDIWYDYATWH
AKSSSLDSAIKVFQRALKALPDSEVLRFAFAELEETHGAIQPAKKIYESLLSNAVNATAL
AHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDSKVAHNVFEAG
LKRFMHEPGYILEYADFLCRLNDDRNIRALFERALSSLPPEESVEVWKRFAQFEQTYGDL
ASMLKVEQRRKEALSRTGDDGSSALEGSLHDVVSRYSFMDLWPCSSKDLDHLARQEWLAK
TINKKVDKSTLANGTSSIGGEKVSAGLATNLKSSALSSKVIYPDTSRMVIYDPRQKPGTG
FVPNVTAPGLPSISSSTTSAPGVSLVGGGTSMPLEEILKVIPPALVTFIAQLPASEGPFP
DVDIVLSILLQSNLPTGQTGKSATSAQMPAASVPSTSDLSGSNKSRPNPSGSSFKPTRDV
QSGKRKDFGRQEDDETATVQSRPLPRDAFRIRQMQKARGATTSQTGSASYGSAFSGELSG
STE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaagaagaaatttgatgcaagatggcagcggagacgaaacagagaaggcg
actgacaatctttctgttgataaatacaatgttgaagctgcggagattttggcaaacgaa
gcactgcatttgcccatctctgaggctgccccgatttacgagcaactcctgtcaacgttt
ccaacagctgccaaattctggaagcagtacgtggaggcacacatggtggtaaataatgat
gatgcagtaaaacagatcttcagtcgttgtttgttgaactgtcttcaaattcctctttgg
cggtgctacattcgtttcatcaggaaagtaaatgaaagaaagggtgcagagaatcaggaa
gagactaggaaagcttttgattttatgctgagttatgttggtactgatattgcatctggg
cccgtatggatggagtacatcacctttttgaagtcattgccggctactacaggccaggaa
gagtcacaacgaatgactgcagtgcggaaggcataccaaaaagctattgttactcctacc
catcatgtggaacaactttggaaggactatgaaaattttgaaaactctgttagccgtgca
ctggctaaagggctattatctgaatatcaaccaaagtacaacagtgcaaaggctgtatat
agagagcggaaaaaatatattgaagaaatagattggaatatgcttgctgtaccaccgact
ggatcctgcaaggaagagcaacaatggatggtgtggaaaaagttgttagcctttgaaaaa
gggaatccccaaaggatagacagtgcgtcctccaatagacgaattgcctttacttatgag
cagtgtcttatgtatttatatcattatcctgacatatggtatgactatgctacatggcat
gcgaaaagtagttctctagattctgcaatcaaagtgtttcagcgggctttgaaggctctt
cctgattctgaggtgctaaggtttgcttttgcggagctggaagaaactcatggagcaatt
cagcctgcaaagaaaatatatgagagcctcttgagtaatgctgtcaatgcaacagcattg
gcacacatacaatttattcgctttttaagaagaactgaaggtgttgaagcagctcgcaag
tacttcttagatgcccgcaaatctccaaactgcacatatcatgtctatgttgcttatgca
atgatggcattttgtcttgacaaagattcaaaggttgcacacaatgttttcgaagcagga
ttgaagagatttatgcatgaacctggctacattcttgaatatgcagatttcttgtgccgc
ttaaatgatgatagaaatatccgtgccttatttgagcgagctttgagctcacttcctcca
gaagaatctgtagaggtttggaagaggtttgcccaatttgagcaaacatatggagatctg
gctagcatgttaaaggtagagcaaaggaggaaggaggctctttctagaacaggtgatgat
ggatcatcagcattggagggctccttgcatgatgttgtttcacgatatagtttcatggat
ctctggccatgctcatctaaggatttggatcatttggcaagacaagagtggcttgccaaa
accatcaataaaaaggttgacaagtcaactctagccaatggaaccagttctataggtgga
gagaaggtttctgcgggactggcaactaatttgaagtcatcagctctatcttcaaaggtt
atttatccagatacttctcgaatggtgatctatgatccaaggcaaaagcctggcactgga
tttgttcctaatgtgacagcaccaggacttccatctatttctagctcaacaacatctgct
ccaggtgtttccttagttggtggtggaacatcaatgccacttgaagaaattcttaaagta
atcccgccggcattggtaacattcatagcacaattgcctgcttcagaggggcccttcccg
gatgtggatattgtgttatcaattttgttgcagagtaacttgccaacaggacaaactggg
aaatcagcaacttcagcacaaatgccagcagcttctgtccctagcacaagtgacctttct
ggctcaaataagtcgcgtcccaatccaagtggttcatcattcaaaccaaccagggatgtt
caatcgggaaaaagaaaagattttggtaggcaagaagatgatgaaactgctacagtacaa
agcagaccacttccgagagatgcttttagaatccgacagatgcagaaagctcgaggggct
accacttcacaaactgggtcagcatcctatggcagtgcattttcaggagagctttctggc
agtacagaatga
DBGET
integrated database retrieval system
