KEGG   Macadamia integrifolia (macadamia nut): 122060936
Entry
122060936         CDS       T07436                                 
Name
(RefSeq) coatomer subunit beta'-1
  KO
K17302  coatomer subunit beta'
Organism
ming  Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:ming00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ming04131]
    122060936
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ming04147]
    122060936
Membrane trafficking [BR:ming04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    122060936
Exosome [BR:ming04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   122060936
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd EIF3I Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WD40_RFWD3 Beta-prop_Nup120_160 TPR_12 WD40_like TPR_8 WD_LRWD1 TPR_1 TPR_2 HEAT_GCN1 TPR_CcmH_CycH Beta-prop_DCAF12 Clathrin ChlI TPR_GEMI5
Other DBs
NCBI-GeneID: 122060936
NCBI-ProteinID: XP_042480007
LinkDB
Position
2:34366893..34385995
AA seq 905 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCVWNYQSQTMAKSFEVTELPV
RSAKFIARKQWIVAGADDMFIRVYNYNMMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKASRRVVIGYDEGSIMIKIG
REEPVASMDSSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSSDGEYAVRESTSRIKIFSKTFQ
EKKSIRPTFSAERIFGGNLLAMCSNDFICFYDWADCRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSSYLDSGRAVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANEVLPSIPKEHYNSVARFLESRAMLEEALEVATDPNYRFDLAIQLGRLEVAKA
IAAEVQSESKWKQLGELAMSTGKLEMAEECLQHAMDLSGLLLLYSAFGDAEGISKLASLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRNDLNK
VNQKAAESLADPEEYSNLFEDWQVALAIESKVAEKRGIYPPAEEYLNYAEKSNVNLVEAF
KSMQIDGEEEAPLENGDTDTGHEELEENGEEVQEDAVEVDADSTDGAVLVNGNEGDEEWV
LAPHH
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcctctcagacttgaaatcaagagaaaacttgcgcaaagatcggaaagagtaaaatca
gtggatctacatccaacagaaccatggattcttgcaagtctttattcgggaagtgtatgc
gtctggaactaccagtcacagactatggcaaaatcttttgaggtcacagagttgccagtt
cgatcagctaaatttatagcacgcaagcaatggattgttgccggagctgatgacatgttc
atacgtgtatacaattacaacatgatggacaaggtcaaagtgtttgaagcacacacagat
tacatcaggtgtgtggcagtccatccaacgcttccatatgtgttatcatcatctgatgac
atgcttataaagctctgggattgggagaagggttggatgtgcactcaaatttttgagggg
cattctcactacgtgatgcaagtgacattcaatccaaaagacactaacacttttgccagt
gcctctctggatcggactataaagatttggaatcttggctcccctgacccaaattttacg
ttggatgcccatttgaaaggggtaaattgtgttgattacttcactggtggcgacaagcca
tatctgatcactggttctgatgatcatactgctaaggtatgggactaccaaaccaaaagt
tgtgtccagacgctagaaggtcacacacacaatgtttccgcagtttgtttccatcctgaa
cttcccataataattacaggctctgaggatgggactgttcgtatctggcatgcaaccact
tataggcttgaaaacacattgaattatggtcttgagcgagtgtgggctattggatacatg
aaagcttcacgccgggttgtaattggatatgatgaaggaagcattatgataaaaattggc
cgagaagagccagtcgctagtatggatagtagtggtaaaattatatgggctaagcataat
gaaattcagactgtgaacattaagagtgttggtgcagattttgaggtgacagatggagaa
cgattacctttggctgtgaaggagttggggacctgtgatctttaccctcagagcttgaag
cacaacccaaacgggaggtttgttgttgtctgtggggacggagagtacatcatttatact
gctcttgcctggagaaatagatcctttgggtcagccctcgaaatcgtttggtcatcagat
ggagaatatgctgttagagagagtacatcacggattaagatattcagtaaaacattccag
gaaaagaagagcatacgcccaacattttctgctgagcgtatttttgggggaaatttacta
gcgatgtgctcaaatgactttatttgcttttacgattgggctgactgtaggttgattcgc
cgaattgatgttaatgtcaaaaatctatattgggccgatagtggagatctagtggcaatt
gccagtgatacatcattttacatccttaagtacaatagagatgttgtgtcatcttattta
gatagtggaagagcggtagatgagcagggtgttgaggatgcttttgagcttctccatgag
acaaatgagagagtcaggacaggattatgggttggggactgtttcatttacaacaactct
tcttggcgacttaactactgtgtcggtggcgaggttacaaccatgtttcacttggatcgg
cctatgtacttgttgggatatcttgctagtcaaagccgagtgtatcttatagacaaagaa
ttcaatgttatgggatacactttgcttcttagtttgattgagtacaagactcttgtaatg
cgtggagacttggagcgtgcaaatgaggtcttaccctcaattccaaaggagcattataat
agtgtggctcgtttcttggaatctcgagctatgctagaggaggcactagaagtagctact
gatcctaattacagatttgatctggccattcagcttgggagactagaagttgcaaaggca
attgccgcagaagtacagagtgaatcgaaatggaagcagttgggcgaattagctatgtct
actggaaagttggaaatggcagaagaatgcttacagcatgctatggacttgagtggattg
ttgctcctttactctgcttttggagatgctgaaggaatatcaaaacttgcatctcttgct
aaagagcaaggaaagaacaatgttgcatttctctgcctttttatgctcggaaaattggag
gattgccttcaactattagttgagagcaaccgaatacctgaagctgctctgatggctcgt
tcctatctgccaagcaaggtctcagagatagtcgcaatttggagaaatgatctcaataag
gttaaccaaaaagctgcagagtctttggcagatcccgaagagtactctaatctatttgag
gactggcaggtggctcttgcaattgaatctaaggttgcagagaaaaggggtatttaccct
cctgcagaagaatacttgaattatgccgagaaatcaaatgtcaaccttgtggaagctttc
aaaagcatgcaaattgatggagaggaagaggcaccactggaaaatggagataccgatact
ggtcatgaggagctggaagaaaatggagaagaggtccaagaagatgctgttgaagtggac
gctgattctaccgatggagctgtccttgttaatggaaacgagggtgacgaagagtgggtg
cttgcaccacatcactag

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