Macadamia integrifolia (macadamia nut): 122061517
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Entry
122061517 CDS
T07436
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122061517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122061517
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122061517
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122061517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
122061517
NCBI-ProteinID:
XP_042480734
LinkDB
All DBs
Position
14:26604188..26625353
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AA seq
916 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKQIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELETQVDHFEAEIEGLSVKKGKTRPPRLTHLETSIGRHKA
HIMKLELILRLLDNDELNPEQVNDVRDFLEDYVERNQDDFEDFSDVDELYNTLPLDKVES
LEDLVTIAPPGLVKGVGAAGAVLGLKTSLAGSTTQISAPLASTVQQGISIPDQVEETASQ
DSNSDTVPRTPPSKNSVVGSVSSTPTGNHSTAVSSTISAPVSSNVSARTLAVGSTASAIL
SGAGSVRGVLDNSVSAVPPSPVNLSGSVKEDENASFPGRRSSPSLAEIGLGRGIGRGSVA
GVISSQPSNSVPLSSGSTIPGNGALGAVPTASDIAKRNILGADERIGSSGQPLVSPISNR
ILLPQVSKAEGTGSLDSNNVSDSTVIGGRVFSPSVVPGVQWRPGSSFQNQPEVGQFRGRT
EIAPDQREKFLQRFNQVQQQSQLNVSHLAGGNHKQFSAQPQNSLLQQFNSQNSTLQSPVG
MGLGVQSPGLNAVTSNSLQQPNSIHQQPTQHALNLPSPKDSDVSHVKIEDQQQQQQQQQQ
QSSSDDAMGEPVSSSGVNKNLLNEDDMKTSYSVDAAAGGSGSLIEPAQVHRDIDLSPGQP
IQSNQPSVGLGVIGRRSVSDLGAIGDNLSGLIANSGGMHDHLYNLQMLEAAYYKLPQPKD
SERPKSYIPRHPAVTPLSYPQVQAPIVSNPAFWERLGIDTLGTDTLFFAFYYQQNTYQQY
MAARELKKQSWRFHRKYNTWFQRHEEPKVTTDEYEQGTYVYFDFHIANDDLQHGWCQRIK
TEFTFEYSYLEDELGV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggagctagccgaaagcttcaaggagagatcgatcgggtactcaagaaggtccaggaa
ggcgttgatgtcttcgacagcatatggaacaaggtttacgatactgataatgcaaatcag
aaggagaaattcgaggcagatttgaaaaaagagatcaagaagcttcagagataccgtgat
cagatcaagacatggatacagtcgagcgagatcaaggataagaaggttagtgcctcttat
gagcaggctctgctggatgctcgcaagcaaattgaacgtgaaatggaaagatttaaggtc
tgtgaaaaagagaccaagacgaaggccttcagtaaagaagggttgggtcagcaacccaaa
actgatcccaaagagaaggctaaatcagagacaagggattggctaaacaatgtggttggg
gagctggagacccaagttgatcactttgaagcagagattgaggggctttctgttaagaaa
ggaaagacaaggccaccccgattgacacatttggagacatctattggtcgacataaagct
catataatgaagttggaattgatcttgaggctgctggataatgatgagttgaatccagag
caagttaatgatgtccgagattttttagaagactatgttgaacgtaatcaggatgatttt
gaggattttagtgatgttgatgagctctacaacactttaccattagataaggtagagtcc
ctggaagatttggttacaattgctcctcctggactcgttaagggtgttggtgctgctggc
gcagttttaggcttgaagacttctttagcaggttcaacaactcaaatatcggcaccatta
gcatctactgttcaacagggtatctccattccggatcaagttgaagagacagcttcccag
gacagtaattctgatactgtcccgagaactcccccttctaaaaatagtgttgtgggttct
gtttcatcaactcctacagggaatcattcaactgctgttagcagcactatttcagcacct
gttagcagcaatgtttcagcacgtacattggctgttggatcaactgcttcggcaatactt
tcgggtgctggttctgttcgaggtgtcctggataactcagtttctgctgttcctccatca
ccagtcaatctgtctggctcagtgaaggaagatgagaatgcaagctttccaggccgaaga
tcctcaccatcacttgctgagattggattgggtaggggtattggtagaggttctgtggct
ggtgtcatatccagccaaccatcaaatagtgtacccttaagttctggaagcacaatccct
ggcaatggagcccttggtgcagttcctactgcctctgacattgcgaagagaaatatttta
ggggctgatgagagaattggaagtagcggtcagccactggtttcccccataagtaaccga
attcttttgccgcaggtttctaaggctgaaggaactggttcattagattctaataatgtt
agtgactctacagttataggtggtagagttttctccccctcagtagttcccggagtacaa
tggagacctggaagctcatttcagaatcaacctgaagtgggacaatttcgtggaagaact
gaaattgcacctgatcaaagagagaagttcttgcagcggttcaaccaggtccagcagcaa
agtcaacttaatgtttcccatcttgcaggaggaaatcataagcagttctctgcccaacca
caaaactcactcctacagcagttcaattctcaaaactcaaccttacaatctccagttgga
atgggccttggagttcagtcgccgggcctcaatgctgttacatctaactctctacagcag
ccaaattctatccatcaacaacctactcagcatgctttgaacttgccttcaccaaaagat
tcagatgttagccatgtgaaaattgaggaccagcagcagcagcagcagcagcagcagcag
cagagttcatctgacgatgcaatgggtgaacctgtttccagttctggagtcaacaagaat
ctcttgaatgaggatgatatgaagacttcatattcggttgatgcagctgctggaggttct
ggctctttgattgagcctgcccaagtgcatagagatattgatctctcccccggtcaacct
atacaatccaatcaaccttcagtcggcttaggtgtcattggtcgaagaagtgtttctgac
cttggtgctatcggtgataacctcagtggattaattgcaaattctggggggatgcatgat
catttatacaatttgcagatgcttgaggctgcttactacaagcttccccaacccaaagac
tcagaacgtccgaagagctatattcctagacaccctgcagtgacccccttgagctatcct
caggtgcaggcacctattgtcagtaatcctgccttctgggagcgactgggtattgacaca
ttgggtactgataccctgttctttgcattttactatcaacagaatacttatcagcaatac
atggctgcaagagagttgaaaaagcaatcatggagattccacagaaaatataacacatgg
tttcagcggcatgaggaaccaaaagttaccactgatgaatatgaacaagggacatatgtg
tactttgactttcacattgccaatgatgacttacaacatgggtggtgccagaggatcaag
actgagtttacttttgagtacagttaccttgaagatgaacttggcgtatag
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