Macadamia integrifolia (macadamia nut): 122061714
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Entry
122061714 CDS
T07436
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122061714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122061714
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122061714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DZR
DUF1258
zf-C3HC4_3
NRDD
Zn_ribbon_LapB
Motif
Other DBs
NCBI-GeneID:
122061714
NCBI-ProteinID:
XP_042481064
LinkDB
All DBs
Position
14:complement(22264391..22289033)
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AA seq
342 aa
AA seq
DB search
MSFNLVLKPSCRGCGSSIDLYGSICTHMTLCLSCGKTMAENHGKCDDCGVTITQFIREYN
VRSSSTSDRTYFIGKFVTGVPNFSKKKNAVNKWSLQKEGLQGCQVTNALRDEEDEDEAIE
EEGGLRKSVKDLQKLFGRATGLLDDSDGKDDDYMDVEMGLSPVVARKQEDAPKEEPADIS
PSEAGPSGSVRGIPSSSKSSKIKRKSGGDDAEVVTGPPAVKVRFDNESKPSVKDERLSTP
KSSASPKISASSAKAGPRLATGPVTEDEVRDVLLEMGPVTMRDLVAKFIARLKSQEVCHY
LSVFMFFTTRLQFLCRHNSTVPLLKQSLPIENLILLETCYYL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaatcttgttttgaagccatcatgcagaggctgtgggtcaagcattgatctt
tacgggagtatttgtacgcatatgactctctgcttgtcctgtggaaaaaccatggcggaa
aaccatggaaaatgtgacgactgtggcgttacaatcacacaatttattcgggagtataat
gtccgatctagttctaccagcgatagaacttacttcattggaaaatttgttacaggggtt
cccaatttttcaaagaagaaaaatgctgttaataaatggtctctccaaaaagaagggctg
caagggtgccaagttacaaatgctttgcgggatgaagaggatgaggatgaagctattgaa
gaggagggaggcctgagaaaatctgtaaaggacctacagaagctgtttggacgagccact
gggctgctggatgattcagatggtaaagatgatgactatatggacgttgagatgggtctt
tcccctgtagtggctcgaaaacaggaggatgcaccaaaggaggagccggctgatatcagc
ccctcagaagcaggaccatcaggatctgtacgaggaatcccttcttcatcaaagtcaagt
aagataaaaaggaaatcaggtggggatgatgcagaggttgtgactggaccacctgctgtg
aaagtgagatttgataatgagtcaaaaccatctgtaaaggatgagcgattgtccactccc
aagagtagtgcatctccaaaaatttcagcttcatctgccaaagctggaccaagactagcg
actggccctgttactgaggatgaagtcagggatgtattgctggaaatgggaccagttaca
atgcgggatcttgttgctaagtttatagcaagactaaaatcacaggaggtatgccattac
ctttctgtcttcatgttctttactacacgattacaattcctgtgtagacacaattcaaca
gtgccattgttgaaacaatctttgccaattgaaaatttaattttgttggaaacatgctat
tatctgtaa
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