Macadamia integrifolia (macadamia nut): 122061776
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Entry
122061776 CDS
T07436
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122061776
03041 Spliceosome [BR:
ming03041
]
122061776
03036 Chromosome and associated proteins [BR:
ming03036
]
122061776
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122061776
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122061776
mRNA cycle factors
Common to processing body (P body) and stress granule
122061776
Spliceosome [BR:
ming03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122061776
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122061776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Fib-H_N
Motif
Other DBs
NCBI-GeneID:
122061776
NCBI-ProteinID:
XP_042481170
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All DBs
Position
14:32561293..32570376
Genome browser
AA seq
626 aa
AA seq
DB search
MRTSWADSVSAAESTAAGSSANSGVGSTSRPAKASYVPPHLRNRPPSADPSGPAFSGSAV
SNDRPSYDTGLGGNRGWGGPRSDMGRPGGYSGGGRLGGGGGGWNNSRGGWDRGREREVNP
FGDDVDVDAEPAFTEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGDALNHNIRR
CKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMNGQFAQRPRGARTV
YPLALILSPTRELSCQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLEKGVDILVATPG
RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRRIVEQMDMPPPGARQTMLFSATF
PKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVLESDKRSHLMDLLHAQRANGTHG
KQSLTLVFVETKKGADSLENWLCINGFPATTIHGDRTQMEREQALRSFKSGATPILVATD
VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNTSLAKSLADL
MQESNQEVPVWLTRYAARTSYGGGGRNRRSGGGRFGGRDFRRDSTYNRGGGSTDYYGGGN
SSGGYGAFPGGYGGGGGGGGYTSAWD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcctgggcggattctgtctctgcagctgagagcacagctgccggttcgtct
gccaatagtggggttggtagcacttcacgtcctgcaaaagcgtcttatgttcctccacac
ctccgtaaccggccgccgtcggctgatccttctggacctgcattcagtggctctgccgtc
agcaatgatcgaccaagttatgatactggtttaggtggaaatcggggttggggtggtcca
aggtctgatatggggcggcctggcggctacagtggtggagggcgccttggtggtggcggt
ggtggttggaacaacagtcgtggtggatgggatcgtggaagggaacgggaggtaaaccct
tttggagatgacgttgacgttgatgcagagccagcatttactgagcaggagaacactggc
attaactttgatgcctatgaagatattccggtggagaccagtggggataatgtgccacca
cctgtgaatacttttgcagagattgacctgggtgatgctctcaatcataacatacggagg
tgcaaatatgttaaaccaacacctgtgcagcgacatgctatcccaatatcccttggaggg
agggacttgatggcatgtgcccagacagggtctggtaagacagcggctttctgcttccca
attatcagcggaattatgaatggacagtttgctcaaagacctcgaggtgcacgtactgtg
taccctctcgctcttattctctctcctacgagggagctctcctgccagatacatgaggaa
gctagaaaattttcctatcaaactggtgtcagagtggttgttgcttatggaggagcacct
attaatcagcagctgcgggacttggagaagggtgttgatattcttgtggcgactcctgga
agattagtagatttgctggaaagggcaagagtttcactacagatgatcagatatttggct
cttgatgaggctgatcggatgttggatatgggttttgaaccacaaattagaaggatcgtg
gaacaaatggacatgcctccaccaggtgctagacagacaatgcttttcagtgccactttc
ccaaaagaaatacagagattggcctcagattttctttctaattacatttttctagctgtt
ggaagggttggttcaagtactgatttgattgtccaaagagttgaatttgtacttgagtct
gacaagaggagccacctcatggaccttcttcatgcgcagagggctaatggaactcacgga
aagcaatctctgacattagttttcgtggagacaaagaagggagctgattcattggaaaac
tggttatgtataaatggtttccctgcaactactattcatggtgatagaacacaaatggag
agagaacaagcgttgagatcattcaagagtggtgcaaccccaattttggtggcaactgat
gtggcagcacgtgggcttgacatacctcacgttgcgcatgtcgtcaactttgatcttccc
aatgacattgatgactatgtccatcggataggacggacagggcgtgctggcaagacaggg
ttggccactgccttcttcaatgaaaacaatacctcattggccaagtcattagcagatctg
atgcaggaatcaaaccaagaagtacctgtttggcttactcgttatgcggcccgaacttcg
tatggaggtggtggtaggaatcggcgttctggcggaggccgttttggtggccgtgatttc
cgtagggattcaacgtataatagaggcgggggtagtacagattactatggtggaggcaac
agtagcggtggatatggggctttccctggcggatatggaggtggaggtggtgggggtgga
tataccagtgcatgggactag
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