KEGG   Macadamia integrifolia (macadamia nut): 122062089
Entry
122062089         CDS       T07436                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122062089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ming03019]
    122062089
   03036 Chromosome and associated proteins [BR:ming03036]
    122062089
Messenger RNA biogenesis [BR:ming03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122062089
Chromosome and associated proteins [BR:ming03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     122062089
    COMPASS/SET1 complex (yeast)
     122062089
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st PAC11 Beta-prop_SCAP TRM82_WD PD40 WD_LRWD1 Ge1_WD40 Tricorn_2nd Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 122062089
NCBI-ProteinID: XP_042481664
LinkDB
Position
14:complement(21936823..21946510)
AA seq 335 aa
MAISLTELDDETVRSMSIGAVFSDFGGKINSVDFHRTKDLLVTTSDDDSVRLYDIANATL
LKTTYHKKHGADRICFTHHPSSVICSSRYKTDSTDEPLRYLSMYDNRCLRYFKGHKERVV
SLCMSPINDSFMSGSLDHSVRIWDLRVNACQGLLHLRGRPTVAYDQQGLVFAVAMEGGAI
KLFDSRSYDKGPFDTFFVGGDTAEVSDIKFSNDGKSMLLTTTNSNIYVLDAYAGEKRCGF
SLEPSSNTGIEATFTPDGQYVVSSSGDGTLHAWSINMRNEVSCWNSHIGVATCLKWAPRR
AMFVAASTVLTFWIPNNGKLNPESGARDLVAVAAV
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcgatatcactcacagaactcgatgatgagactgtacgcagtatgtcgattggagcc
gttttctcagattttggtggaaagatcaattcagttgattttcatcgtaccaaggatcta
ctggttaccactagtgatgatgactcggtgcggctttatgatattgcaaatgcaactttg
ttgaagactacataccacaagaagcatggtgctgatcgtatatgctttacacaccatcca
agctctgttatatgctcttcgagatacaaaacagattccactgatgaacccttgcgatat
ctttccatgtatgacaatcgatgtctccgctacttcaaagggcacaaagagagagttgtt
tcactctgcatgtctccaattaatgacagcttcatgtctggttcacttgatcacagtgtt
agaatatgggatcttcgtgtaaatgcttgccagggactccttcatttgcgaggtaggcct
acagttgcatacgatcagcagggtcttgtttttgcagtagcaatggaagggggtgctatt
aaactgtttgattcacgctcttatgataagggtccatttgacactttttttgttggagga
gatacagctgaggtctctgatatcaaattcagcaatgacggaaaatctatgcttttgaca
acaacgaatagcaatatctatgttcttgatgcatatgcaggggagaagcgatgtggcttc
agtttggaaccatcttcaaatacaggcatagaggcaacttttacaccagatgggcaatat
gtggtttcaagctcaggagatggaaccttgcatgcatggagtatcaacatgcgaaatgag
gtttcttgctggaatagccacattggtgtagcaacttgcttgaagtgggcaccccgtagg
gccatgtttgttgctgcatctactgttcttacattttggattccaaacaatggtaaattg
aatccagaatctggcgccagggatcttgttgctgttgctgcagtgtag

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