Macadamia integrifolia (macadamia nut): 122062352
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Entry
122062352 CDS
T07436
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122062352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122062352
Enzymes [BR:
ming01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122062352
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
122062352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
122062352
NCBI-ProteinID:
XP_042481877
LinkDB
All DBs
Position
2:37820366..37841145
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AA seq
787 aa
AA seq
DB search
MANSGSPTGSPSPQAVKQYGVTKPISSAGPTEADIRKSLELEKFLVDAGLYESSEEAALR
EEVLGQIEQIVKGWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPRADIDTLCVGP
SYVNREEDFFIILHDILADMEVVSELQPVPDAHVPVMKFKFRGISIDLLYASISLLVVPE
DLDISHGSVLYNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWARRRGVYSNV
TGFLGGVNWALLVARVCQLYPNANPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVW
DPRRNPRDRTHLMPIITPAFPCMNSSYNVSTSTLRVMMEQFQFGNKICEEIELNKAQWGA
LFEPYIFFEIYKNYLQVDIVAADADDLLSWKGWVESRLRQLTLKIERDTFGMLQCHPYPN
EYVDTSKQCLHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHSVNMYMFWKPGMEIYVS
HVRRKQIPLYVFPDGYRRPRPPRPPALQADKSSQEDDECRDCCAETTLKRKKDPEVSDLN
AHGKPEKRASISPPRLESVSPFTNCGSGGTSQTEGLGAGNADGHAESGFTVSKLENKEGA
GNDVRTHKPERETSTPFVGSALLTETCQDVVLEFNVGNRASGKLDNAEVGSGIGACGRLN
TAVLTSEDIESVSVTSSCENADISEGSDNLGSLQVGGASEADSETLLDNGNINGSGIFQN
GLSEELEPNVALGMVLKARSGATSEPVQKSVIRHVFPNPTFSLGNVCTLLSLYCPVWLVG
LLLFFAG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggccaattctgggtctccgactggttccccgtctcctcaagcggtgaaacagtatggc
gtgacaaaacccatatcttctgctggacctacggaggcggacattcggaagagcttggaa
ttggaaaagttcttggttgatgctgggctttacgagagcagcgaagaagctgcactgaga
gaagaggttcttggacaaattgaacagattgtgaaaggttgggtgaagcagctaactcga
cagagagggtatactgatcaaatggttgaggatgcaaatgccgtgatatttacgtttggg
tcttataggcttggggtacatggtcctagggccgacatagatactctgtgtgttgggcct
tcctatgtgaatcgagaggaagatttctttattattttgcatgatatcctggctgacatg
gaagtagtttctgagcttcaacccgttccagatgctcatgtgcctgtgatgaaattcaag
ttccgaggaatatctattgatcttctttatgctagtatctctcttttggttgttccagaa
gatttggatatctctcatggatctgtattgtacaatgtcgatgaacaaactgttcgaagc
cttaacggatgccgtgttgcagatcaaattcttcgacttgttccgaatgttgagcatttt
cgtacaacactcaggtgtctaaagttttgggccagaaggcgtggtgtttattcgaacgtg
actggatttcttggtggtgtgaattgggctcttttggttgctcgggtatgccagctttat
cctaatgcaaatccaagtatgctggtttcccgctttttcagagtttatacacagtggcgt
tggccaaaccctgtgatgctttgtgcaattgaagaggatgaactggggttttctgtttgg
gacccccgtagaaacccccgtgaccggactcatcttatgccaatcatcactcctgcattt
ccttgcatgaactctagctacaatgtgtcgacaagtaccctccgggtgatgatggagcag
ttccagtttggtaacaagatctgtgaggaaattgaactgaataaagctcagtggggtgct
ttatttgagccttatatttttttcgagatatataaaaactatctgcaggttgatatagtt
gcagctgatgctgatgatttgctttcttggaagggctgggtagagtcccggcttaggcag
cttactctcaagattgagcgggacacatttgggatgctgcagtgccatccttatccaaat
gagtatgttgacacgtcgaagcagtgtttgcattgtgccttttttatgggtttgcagcgg
aaacagggtgtgaaagtccaggaaggccagcaatttgatatacgtgggactgttgacgag
ttcaggcattcagtgaacatgtacatgttttggaaaccagggatggaaatctatgtttct
catgtccgtagaaagcagatccctttgtatgtgtttcctgatgggtacagacggcccagg
ccaccaaggcctccagctctgcaggctgataaatcatctcaagaagatgatgagtgcagg
gattgctgtgcagagacaacacttaagaggaagaaggatcctgaagtttctgatctgaat
gcacatgggaaaccagagaagcgtgcttctatcagccctccaagactcgaatctgtttct
ccttttaccaactgtgggtctggaggcacatctcagactgagggtttaggagcgggaaat
gcagatggtcatgctgagtctgggtttacagttagcaagttagaaaacaaggaaggtgct
ggaaatgatgtacggacccacaaaccagagagagagacttcaactccctttgttggtagt
gccctgttaactgagacgtgtcaggatgtcgttcttgagtttaatgtagggaaccgggca
tcagggaaattggacaatgcagaggttggatctggcattggagcttgtggcaggctgaat
actgcggtccttacttctgaggacatcgaatcggtatctgtaacaagttcttgtgagaat
gcagatatctctgaagggagtgataacctggggtctttgcaggttggtggtgcatctgaa
gcagattcagagacactattggataatggaaacataaatgggagtggaatttttcagaat
ggtttgtcagaagagttagagcctaatgttgcactggggatggtcctgaaagctcgtagt
ggagcaacttcagagcctgtccagaaatcagtgataaggcatgtgtttccaaaccctaca
ttttctcttgggaatgtttgtactctgttatctttatactgtcctgtttggttggttggt
ttgcttctcttttttgcaggttga
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