Macadamia integrifolia (macadamia nut): 122062613
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Entry
122062613 CDS
T07436
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122062613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122062613
03036 Chromosome and associated proteins [BR:
ming03036
]
122062613
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122062613
Coactivators
SAGA/TFTC/STAGA complex
122062613
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122062613
STAGA complex
122062613
TFTC complex
122062613
SAGA complex
122062613
SLIK complex
122062613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD_LRWD1
LisH_PAC1
WD40_like
LisH
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122062613
NCBI-ProteinID:
XP_042482194
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MEEDEIEKAVLAYLKKKGFKQTELTLQEEQSKSSSAAASQTDPEVAKKILTFSESENGPA
QYHEGYSKLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHTQEARTFFNSFREDHE
MMHLRDLQKLEGVLSPLHLEEMEFAHTLRQSKINIKMCQYSYELLLQYLQKTQSITILGI
INEHINFQVSPGQPSSISDDADVVTLVGSSHETAKQINQQEIRWGLLEDSLEDRLEKAGG
LMSDSEKADGENKEGDLEENKKRSVDGGKQGASVKKLKKDKVVGATGKTIRSETNTVSVA
PRVKPELTLPVMPTEVEHSILEDLRNRVQLGSLALPSVSFYTFINTHNGLNCSSISHDGS
LVAGGFSDSSLKVWDMLKIGQQTDTSSVQGENESTPSENLLGTEDGKRSYSLFQGHAGPV
YSAAFSPLGDFLLSSSADSTVRLWSTQLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHD
RTARIWSMDRIQPLRIMAGHLSDVDCVQWHMNCNYIATGSSDKTVRLWDVQSGECVRIFI
GHRSMILSLAMSPDGRYMASGDEDGMIMMWDLSSGRCVTPLMGHTSCVWTLAFSCEGSLL
ASGSADCTVKLWDVTASTKTPRTEENKAGSTNRLRSLKTLPTKSTPVYSLRFSRRNLLFA
AGVLSKSV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgagatcgagaaagctgtgcttgcgtatctcaagaagaagggctttaag
caaacagagcttaccctccaggaagaacaaagtaagagctcctctgctgctgcttcacag
actgatccagaagtcgccaagaagatccttactttttctgaatcagagaatggtccagcg
cagtaccatgagggatatagtaaattacggtcatggacgtatagttctttggatttgtac
aagcatgagttacttcgtgtgctctatcctgtatttatccattgtttcatggatcttgtg
gcaaaagggcacacccaggaagctagaacattcttcaatagcttccgcgaagaccatgaa
atgatgcatttacgagaccttcaaaagctggaaggggttctttcacccttgcatcttgag
gaaatggaatttgcacatactctgaggcagagcaaaatcaacataaagatgtgtcagtac
tcctacgaacttctgctgcaatatctacagaaaacacagtcgattacaatactcggaatt
attaatgaacacattaattttcaagtttctcctggccagcccagttcaatttccgatgat
gctgatgtggtaactctggttgggagcagccatgaaacagctaagcagattaatcagcaa
gaaattcgttgggggttgctagaagattctttggaagatcgtttggagaaggctgggggt
ttgatgtcggattctgaaaaggctgatggagaaaacaaagagggggacttagaagagaac
aagaagagatcagtggatggaggaaaacaaggtgcttcagtcaagaagttgaaaaaggac
aaggtggttggtgccacagggaaaaccattcgttccgagacaaacacagtgtccgtggct
ccccgtgtaaaaccagagcttacattaccagtaatgccaacagaagtagaacattctatt
cttgaagacctcagaaaccgtgtacagttgggaagtttggccctaccatctgttagcttt
tatacattcattaacacacataatggtttgaactgttcttcaatatcgcatgatggatcc
ttggttgctggcggattctcagactcgtcgctgaaggtctgggacatgttgaagattgga
caacaaacagacacttcttctgtgcagggagaaaatgaatcaactcctagtgagaatttg
ctgggaacagaagatgggaaaagatcctattcattgtttcaaggtcatgctggacctgtt
tattcagctgcatttagtcctcttggggattttcttctatcctcttcagctgactcaacc
gttcggttgtggagtacacagctgaatgcaaatcttgtttgctataaaggtcataattac
cccgtgtgggatgttcagtttagtcctgtcgggcattattttgcgagctcttcacatgat
cggactgctaggatttggtccatggacagaatacagcctctaagaatcatggcaggacat
ttatctgatgtcgattgtgtgcaatggcatatgaactgtaactacatcgcaactggatca
agtgacaagactgttagattgtgggatgtgcagagtggagaatgtgttcgcattttcatt
ggtcaccggagtatgatcctatctttggcaatgtcgcctgatgggcggtatatggcatca
ggtgatgaagatgggatgatcatgatgtgggatctttcaagtggtcgttgtgttactcct
ttgatggggcacacatcatgtgtatggacacttgcttttagttgtgaaggttcgcttttg
gcttctgggtctgcggattgtactgtgaaattgtgggatgtgacagcaagcaccaagaca
ccgagaacggaagaaaacaaagcaggaagcacaaatagactaagatcattgaagactctc
ccaaccaagtcgactccagtttactctttgcggttttctcgaaggaatcttctttttgct
gctggagtgctctcaaaaagcgtataa
DBGET
integrated database retrieval system
