Macadamia integrifolia (macadamia nut): 122062613
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Entry
122062613 CDS
T07436
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122062613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122062613
03036 Chromosome and associated proteins [BR:
ming03036
]
122062613
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122062613
Coactivators
SAGA/TFTC/STAGA complex
122062613
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122062613
STAGA complex
122062613
TFTC complex
122062613
SAGA complex
122062613
SLIK complex
122062613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
DSE1_N
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_TEP1_C
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ASA1
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_SCAP
PAC11
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
LisH_PAC1
WD_LRWD1
LisH
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122062613
NCBI-ProteinID:
XP_042482194
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MEEDEIEKAVLAYLKKKGFKQTELTLQEEQSKSSSAAASQTDPEVAKKILTFSESENGPA
QYHEGYSKLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHTQEARTFFNSFREDHE
MMHLRDLQKLEGVLSPLHLEEMEFAHTLRQSKINIKMCQYSYELLLQYLQKTQSITILGI
INEHINFQVSPGQPSSISDDADVVTLVGSSHETAKQINQQEIRWGLLEDSLEDRLEKAGG
LMSDSEKADGENKEGDLEENKKRSVDGGKQGASVKKLKKDKVVGATGKTIRSETNTVSVA
PRVKPELTLPVMPTEVEHSILEDLRNRVQLGSLALPSVSFYTFINTHNGLNCSSISHDGS
LVAGGFSDSSLKVWDMLKIGQQTDTSSVQGENESTPSENLLGTEDGKRSYSLFQGHAGPV
YSAAFSPLGDFLLSSSADSTVRLWSTQLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHD
RTARIWSMDRIQPLRIMAGHLSDVDCVQWHMNCNYIATGSSDKTVRLWDVQSGECVRIFI
GHRSMILSLAMSPDGRYMASGDEDGMIMMWDLSSGRCVTPLMGHTSCVWTLAFSCEGSLL
ASGSADCTVKLWDVTASTKTPRTEENKAGSTNRLRSLKTLPTKSTPVYSLRFSRRNLLFA
AGVLSKSV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgagatcgagaaagctgtgcttgcgtatctcaagaagaagggctttaag
caaacagagcttaccctccaggaagaacaaagtaagagctcctctgctgctgcttcacag
actgatccagaagtcgccaagaagatccttactttttctgaatcagagaatggtccagcg
cagtaccatgagggatatagtaaattacggtcatggacgtatagttctttggatttgtac
aagcatgagttacttcgtgtgctctatcctgtatttatccattgtttcatggatcttgtg
gcaaaagggcacacccaggaagctagaacattcttcaatagcttccgcgaagaccatgaa
atgatgcatttacgagaccttcaaaagctggaaggggttctttcacccttgcatcttgag
gaaatggaatttgcacatactctgaggcagagcaaaatcaacataaagatgtgtcagtac
tcctacgaacttctgctgcaatatctacagaaaacacagtcgattacaatactcggaatt
attaatgaacacattaattttcaagtttctcctggccagcccagttcaatttccgatgat
gctgatgtggtaactctggttgggagcagccatgaaacagctaagcagattaatcagcaa
gaaattcgttgggggttgctagaagattctttggaagatcgtttggagaaggctgggggt
ttgatgtcggattctgaaaaggctgatggagaaaacaaagagggggacttagaagagaac
aagaagagatcagtggatggaggaaaacaaggtgcttcagtcaagaagttgaaaaaggac
aaggtggttggtgccacagggaaaaccattcgttccgagacaaacacagtgtccgtggct
ccccgtgtaaaaccagagcttacattaccagtaatgccaacagaagtagaacattctatt
cttgaagacctcagaaaccgtgtacagttgggaagtttggccctaccatctgttagcttt
tatacattcattaacacacataatggtttgaactgttcttcaatatcgcatgatggatcc
ttggttgctggcggattctcagactcgtcgctgaaggtctgggacatgttgaagattgga
caacaaacagacacttcttctgtgcagggagaaaatgaatcaactcctagtgagaatttg
ctgggaacagaagatgggaaaagatcctattcattgtttcaaggtcatgctggacctgtt
tattcagctgcatttagtcctcttggggattttcttctatcctcttcagctgactcaacc
gttcggttgtggagtacacagctgaatgcaaatcttgtttgctataaaggtcataattac
cccgtgtgggatgttcagtttagtcctgtcgggcattattttgcgagctcttcacatgat
cggactgctaggatttggtccatggacagaatacagcctctaagaatcatggcaggacat
ttatctgatgtcgattgtgtgcaatggcatatgaactgtaactacatcgcaactggatca
agtgacaagactgttagattgtgggatgtgcagagtggagaatgtgttcgcattttcatt
ggtcaccggagtatgatcctatctttggcaatgtcgcctgatgggcggtatatggcatca
ggtgatgaagatgggatgatcatgatgtgggatctttcaagtggtcgttgtgttactcct
ttgatggggcacacatcatgtgtatggacacttgcttttagttgtgaaggttcgcttttg
gcttctgggtctgcggattgtactgtgaaattgtgggatgtgacagcaagcaccaagaca
ccgagaacggaagaaaacaaagcaggaagcacaaatagactaagatcattgaagactctc
ccaaccaagtcgactccagtttactctttgcggttttctcgaaggaatcttctttttgct
gctggagtgctctcaaaaagcgtataa
DBGET
integrated database retrieval system
