Macadamia integrifolia (macadamia nut): 122062889
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Entry
122062889 CDS
T07436
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog isoform X1
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122062889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ming03009
]
122062889
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122062889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_LRRK2
Beta-prop_DCAF12
Beta-prop_SCAP
VPS8_N
WD40_like
VID27
Beta-prop_IP5PC_F
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122062889
NCBI-ProteinID:
XP_042482496
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MGIFEPFRGIGYITSSVPFTVQRLGTETFVTVSVGKAWQVYNCAKLSLVLVGPQLPKKIR
ALASYRDYTFAAYGNNIGVFKRAHQVATWTRHNDKVNWLLLFGEHVLSLDAKGNLFIWPF
KGLDENLAPIGHIVLEDKFIPSCIMHPDTYLNKVIIGSQEGSLQLWNISTKKKLYEFKGW
NSSIFCCVSSPALDVVAVGCADGKIHVHNLRYDEEVVTFSHSARGAVTALSFRTDGQPLL
ASGDSSGVISIWDLEKRKLQSVIREAHDNSIMSLHFFTNEPVLMSSSADNSIKMWIFDTS
DGDPRLLRFRSGHSSPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHISKR
ARKLRMKVEEIKLKPAIAFDCAEIRERDWCNVVTCHMDTPRAYVWRLQNFVLGEHILTPS
LDSQTPIKTCAISACGNFAVLGTEGGWVERFNLQSGISRGSYIDIYESRSCAHDSEVVGV
ACDATNTLMISAGYHGDVKIWDFKGRELKSRLEVSSSVVKLVYHRSNGLLATVADDMVIR
VFDIVALRIVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILARQIDAIQVDVA
ITALSLSPNMDVLATSHVDQNGVFLWVNQAMFSGASYVDSYASGKEVVSVKWPAISSKEI
ADEENHGNHIGCKLHVKDTAYASHFNQQIPDLVTLSLLPKSQWQSLINLDIIKVRNKPIE
PPKKPEKAPFFLPSVPSFSGDILFKPTGIAVEEKEKKDDEMESSKRIPDQQTSRFLQLLL
SSAEMKNFSAFTDYIKGLSPSTLDLELRMLQIIDDEDQQEPEKRSELYSIELLLDYFIHE
ISCRKDYEFIQAVIRLFLKIHGETVRRQSKLHDKAKKLLEVHSSVWQTLDKMFQNASCML
TFLSSSQL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggggattttcgaaccctttcgtggtattggatatattacaagcagtgttcccttcacc
gtgcagagattgggaactgaaactttcgtcactgttagcgttggaaaagcttggcaggtt
tacaattgtgccaagctgtcgttggtgctcgttggccctcaattgccaaagaagatccga
gctcttgcatcctatcgggactacacatttgccgcatatgggaataacattggcgttttc
aaacgtgctcaccaggtagcaacatggaccaggcataacgataaggtcaattggttgctc
ttgtttggagaacatgtactaagtcttgatgctaagggtaatctattcatatggcctttt
aaagggctcgatgaaaatcttgctccaattggacatattgtcctagaagacaaattcatc
cctagctgcataatgcatcctgacacttacttaaacaaggttataattgggagtcaggaa
ggttcactgcagctttggaatattagcacaaagaagaaactttatgagttcaaaggctgg
aattcatctatattttgctgtgtttcctcacctgcactagatgtagttgctgttggctgt
gctgatgggaaaattcatgttcataatcttcggtatgacgaagaagtagttacatttagc
cattctgcacgaggtgccgtgactgccttgtcttttaggactgatggacagcctctttta
gcatctggagattcatcgggtgtcataagcatatgggatcttgagaagagaaagctccaa
tcagtcatacgagaggcccatgacaattcaataatgtcgctacactttttcactaatgag
cctgtgcttatgagttcttctgctgataactctatcaagatgtggatatttgacacgagt
gatggggatcctcgccttttacgcttccgaagtggccatagttctcctccactttgcatt
aggttttatgctaatggaagacacattttatcagctggtcaggatcgtgcctttcgtctt
ttctctgttattcaggatcaacaaagtagagagctttctcagcgtcatatctctaagagg
gcgaggaaacttaggatgaaggtggaagaaataaaattgaagcctgctattgcatttgat
tgtgctgagatccgtgaacgtgattggtgcaatgttgtaacttgccatatggatactcca
cgggcatatgtgtggaggcttcagaactttgtccttggtgagcacatcctgacgccaagc
ttggacagtcaaacacccattaagacttgtgcaatcagtgcttgtggtaattttgccgtt
ctggggacagaaggtggatgggtagagagatttaatctccagtcaggaatcagccgaggg
agctacatagacatttatgaaagcagaagctgtgcccatgacagtgaagtggttggagtt
gcttgtgatgctacaaataccctcatgataagtgctggatatcatggagatgtaaagatc
tgggatttcaaggggcgtgaattgaaatccagattggaagtcagttcttctgtggtcaag
ttagtttatcaccgatccaatgggcttttggcaactgtggctgatgatatggttatccgt
gtgtttgacattgttgccttacgaattgttcgtaaatttgaaggccatacagatcgaatt
actgacttgtgtttcagtgaggatgggaaatggcttttgtcatccagtatggatggaagt
cttagaatttgggatgttatccttgcaagacagattgatgcaatacaagtggatgtggct
atcacggcactgtccctgtcaccaaatatggatgttttggcaacttctcatgttgatcaa
aatggtgtctttctgtgggttaaccaggccatgttctctggagcttcttatgtggattca
tatgcaagtgggaaagaagttgtcagtgtcaagtggccagccatctcttcgaaggaaatt
gctgatgaggagaatcatgggaaccatattgggtgtaaattacatgttaaggacactgct
tatgcctcacatttcaatcaacagatccctgatctagtaactctctcattgttgccaaaa
agccagtggcaaagcttgatcaatttggacattataaaggtccgcaacaaaccaattgag
ccacccaaaaagccagaaaaggctccatttttcttgccatcagtcccatctttttctgga
gacatattgttcaaacctactggcatagctgttgaagaaaaggagaaaaaagatgatgag
atggaaagcagtaaaaggatacctgatcaacagacctcccgatttctgcaattacttctt
tcctctgcagaaatgaaaaatttttcagcatttacagactacatcaaaggtttatctcca
tcaacattagatttggagctccggatgcttcagatcatagatgacgaagatcagcaagag
cctgaaaagagatctgaattatattccattgagctgctacttgattacttcatacatgag
atttcgtgcagaaaagactatgaattcattcaagcagtaattagattgtttcttaagata
cacggcgaaacagttaggcgccagtctaaacttcatgacaaggcaaagaaacttttagaa
gttcatagttcagtatggcagacactggataaaatgtttcaaaatgcaagttgcatgctt
acatttctcagcagttcacagctctaa
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