Macadamia integrifolia (macadamia nut): 122063033
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Entry
122063033 CDS
T07436
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122063033
03015 mRNA surveillance pathway
122063033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122063033
03041 Spliceosome [BR:
ming03041
]
122063033
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122063033
Spliceosome [BR:
ming03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122063033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
122063033
NCBI-ProteinID:
XP_042482622
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFPPELDHLVDMTKVKIDTVKPWIAKRVTELL
GFEDEVLINFIYGLLDRKDVNGKEVQIHLTGFMEKNTGKFMKELWTLLLSAQKNASGIPQ
QILDATDEELRKKKAEADRITLEIHKRKEKEGRELQLEKLKKMDSGDDESRANKAAPDPV
LKHSQARGSSEENEADERNGSRKMNRASKSPNSVDRSSFSRSPSRSVSKSFSNSRSYSDE
RHRSRSISRSPQTRRHSISPEKWNRSPRKRSVSPHYRHSPRKPRSPLRRRSHHSRHRSSS
YSQRRSLSPVRRRLSSPSRRRSPSPVWRRSPSPVRNRSPPPLRHGLLSPVRRRSRRSPSP
PRRRSPPMRRRSPFSVRRRSPAPSRRRSPPSRWSSPSPVRGRSPSPVRRSPLSRFPSHRR
RSPLRSSRQRYRSRSPYKSRSPAYRSRRSLSRDRDLRANGMESRSARDDYVSQRVPGKTS
PVRHTPKREVERLGQAHRGSDSESHQPRISLRSPQRDPTIRRNNQKKLALAHSPDSSQRS
PESSPHMGKSSPQDDRACNPSESPVRQGKERMSHGSPSPVRQPRKHIAHHDSSETSSEEE
MGHAREDGDYRTNHSERRIRHSPTFGHKNNYSVEDFQEKLYPPERVDGHQSAEDMGHPDN
TELKKKDQDKKSLKASMGTDHSENPIQKDSTLVGDIEYGPGRQDGRSFVPDDSQVGPQSA
KKRGRVSPSSCEKLQKSYSREGNKSEERKHSHSSNAEERDRGHMTEILRKSIKKVDRKNR
PGASDSDSDSEENGKHRSDYMEKRKHKKSSRHEVASDDNAYDDSEIDERKEAKRRRKEEK
RLRKEERRRRREERHRRREERRASKLKAKSVDTVAPPSDFEKIRNDVDDSELEVDARKDS
NPSDTDETQSKQKKLEIELRKKALESLRAKKGTNY
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgggttcttccgaggcacctctgccgatcaggatactcgtttctcgaacaaa
caggcgaagctgttgaaatcccagaagttccccccggaattggatcatttggtggatatg
actaaggtgaagatagatacggttaaaccctggatagctaagagggtaacagagcttctt
ggatttgaggacgaagtacttatcaacttcatatatggcctgctagatagaaaggacgtg
aatggaaaagaggtgcaaatccatctcactggattcatggagaaaaacactggaaaattc
atgaaagaactttggactctactgctcagtgctcagaaaaatgctagtggtatccctcaa
caaatattggatgctacagacgaggaacttaggaagaaaaaggcggaagcagatcgaatc
acccttgaaattcataagaggaaagagaaagagggaagggagctccagctagagaagctg
aagaagatggacagcggtgatgatgaatcgagggccaataaagctgcacctgatcctgtc
ttgaagcattcacaggccagaggctccagtgaagagaacgaagctgacgagaggaatgga
tccaggaagatgaacagggcatccaaatctccaaattcagtggatcgttcctcttttagt
cgctccccttccaggtcagtcagcaagtcattttccaattcaaggagctactcagatgaa
aggcacagatcaaggagcatatccagatcacctcaaacacgaaggcattctatttctccc
gaaaagtggaatcgatctccaaggaagcggtctgtttctcctcattaccggcattctccg
cgaaaacctcgttctcctttacggcggagatcacatcattcaagacacaggtcatcatca
tattcgcagcgtagatcgctttctcctgtgcggcgtagactgtcctctccatcaagacgt
agatcaccttctcctgtgtggcgtagatcgccttctcctgtgagaaatagatctcctcct
cctctgcggcatggattactttctcctgtgcgacgtagatcacgtagatctccatcgcct
ccacgtcgtaggtctcctcctatgcgtaggaggtctccttttagtgtccgtaggaggtca
ccggctccttcccgacgtcggtctcctccttctaggtggagttccccatcaccagttcgg
ggcaggtcaccctctccagttaggagatctcctctttctaggttcccaagccataggagg
agatcaccattgcgatcttcaagacagagatataggagtcgtagtccttataaaagtcgc
agtcctgcatatcgaagtcgtagaagcttgagtagggaccgtgatcttagagctaatggt
atggaatccagaagtgcacgtgatgattatgtctcgcaaagggtccctgggaagacatct
cctgttcgtcatactcccaagagagaggttgaacgactaggtcaggcacacaggggatca
gattcggagtctcaccaaccacgaatttcgttgagatcaccacaacgagatcctaccatc
cgaaggaacaatcagaaaaagcttgctttggctcattcaccggattcatctcaaaggtcg
ccagaatcatcaccgcacatggggaaatcaagccctcaggatgatagggcctgcaatcca
tctgagagtcctgtgaggcaagggaaagaaaggatgagtcatggcagtccaagtcctgtg
agacaaccaagaaaacatatagctcatcatgacagctcagaaacaagttcggaggaagag
atgggtcatgccagggaggatggggattatagaactaatcattcggaaagaagaatcagg
cattcacccacatttggccataagaacaattattctgtggaggacttccaagagaaattg
tatccccctgaaagagtggatggtcatcagtctgccgaagatatgggccatccagataac
acagagctgaaaaagaaagaccaggacaaaaagagtttgaaagcttcaatgggaactgat
cattcagaaaatcccatccaaaaagattctactttggtgggagatattgagtatgggcct
gggaggcaagatggaagaagctttgtaccggatgatagtcaggttggaccacaatctgct
aagaaacgtggaagagtttctccttcatcatgtgaaaaattacagaaatcatattccaga
gaaggtaataaatcagaggagaggaagcattcccattcaagcaatgctgaggagagggac
cggggtcacatgacagaaatattacggaaatcaataaagaaggttgataggaagaatcgt
cctggtgcctctgattctgattctgattcagaggaaaatgggaaacacagatctgattat
atggagaagagaaagcataagaagtcaagtaggcatgaagtggcttcggatgataatgca
tatgatgattctgaaatagatgaaaggaaggaggccaagagaagaaggaaggaagagaag
agattgaggaaagaggagaggcggcgacgaagggaagaacgccaccgtagaagggaagaa
cgccgtgcgagtaagctgaaagccaaatcagtggacacagttgctccaccttcagatttt
gaaaaaattcgaaatgatgtggatgattcagaacttgaggttgatgccaggaaagattca
aatccaagtgacactgacgaaacacagtctaagcagaaaaaacttgagattgagctgcga
aagaaggctcttgaatcgctaagagcaaagaagggcactaattactaa
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