Macadamia integrifolia (macadamia nut): 122067246
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Entry
122067246 CDS
T07436
Name
(RefSeq) autophagy-related protein 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122067246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122067246
03029 Mitochondrial biogenesis [BR:
ming03029
]
122067246
Membrane trafficking [BR:
ming04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122067246
Others
Specific organelles associated proteins
Auto phagosome
122067246
Mitochondrial biogenesis [BR:
ming03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122067246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ATG16
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
WDR54
Beta-prop_NWD2_C
Beta-prop_DCAF4
PQQ_3
Cytochrom_D1
WD40_like
Beta-prop_Vps41
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
122067246
NCBI-ProteinID:
XP_042487018
LinkDB
All DBs
Position
2:complement(8466000..8473838)
Genome browser
AA seq
516 aa
AA seq
DB search
MIGLLDFRSSDEIAVDAIKHAVKALRKRHLLEEGAHAPAFIAISRPFLSQGSEWKEKAEN
LELELQQCYKAQSRLSEQLVVEVAECRTSKALVQEKEAVVTNLQNEVTQAREECSQLKEI
LEEKTKALDLVVSENQALRAQLEELTLKAKNAEAENKMLIDRWMLQKMQDAERLNEVNAL
YEELKDRLKSSSIEQLARQQVDGVVRQSEAGAEYFVESSVPTALKYKINAHEGGCGSVLF
EHNSNRLVSGGQDQTIKIWDTNSGALSRTLHGCIGSVLDLTITHDNKAVIAASSSSNLYV
WDVGSGRVRHTLTGHVDKVCAVDVSKISGRHAVSAAYDRTIKLWDLQKGYCTNTIIFPSN
CNALCFSMDGQTICSGHVDGNLRLWDIQTGRLLSEVAAHSQAVTSICPSRSGNIVLTSGR
DNLHNLFDMRTLEVCGTFRANGNRVASNWSRSCISADDNHVVAGSVDGSIYIWSRVGADI
VSTLREHSAPVLACSWSELGKPLASADKNGNLCIWT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatagggttgttggatttcaggtcttcggatgaaatcgcagtggacgctattaagcac
gctgtgaaggcgctacgaaagcggcatctgctcgaggaaggtgctcatgctccggctttc
atcgccatctccaggcctttcctttcccagggatcagaatggaaagagaaagcagaaaac
cttgaactggaacttcaacaatgttacaaagctcaatcaagattgtctgagcagcttgtg
gtagaagtagcggagtgcagaacatcaaaagcactggttcaagagaaagaagcagtagtt
actaatctgcaaaatgaggttacgcaagcaagagaggaatgctctcaattaaaggagatt
ttagaagaaaagacaaaagctctagacttggttgttagtgagaaccaggcacttagggcg
caacttgaagagttgacactgaaagctaaaaatgcagaggctgaaaataagatgctgatt
gaccgctggatgctgcaaaaaatgcaggatgctgaacggttgaacgaggttaatgcatta
tatgaggagttgaaggatcggttgaagtccagcagcatagaacaactggcacggcagcaa
gttgatggtgtagtccgccaaagtgaagcaggagctgagtactttgtggaatcaagtgtc
cctactgcactcaaatataaaatcaatgcccatgaaggtggctgtggttctgtattattt
gagcacaactcgaacaggttggtcagtgggggacaggatcagacaatcaaaatatgggat
acaaacagtggggcactaagtcgcactcttcatggatgcattggttctgttcttgacctc
actattacccatgataataaagctgttattgcagctagcagctcaagcaacttgtatgta
tgggacgtggggtctggtcgagtccgccatacgctcacagggcatgtcgataaagtatgt
gctgtagatgttagcaaaatttcaggtcgtcatgcagtgagtgcagcttatgataggaca
attaaactttgggatctgcaaaaaggttattgcaccaacacaattatcttccccagtaac
tgcaatgctctttgcttcagcatggatggacagaccatctgctcaggtcatgttgatggg
aaccttcgcctgtgggatattcagacaggaaggctacttagtgaagttgctgcacattca
caggccgtcacatctatttgtccctctcgaagtggcaatatcgtgttaacaagtgggagg
gataacttgcataatctatttgacatgcgaactttggaagtttgtggcacattcagagca
aatggaaacagggtggcatctaattggagccgttcttgcatcagtgcagatgacaatcat
gttgtggcaggctctgttgatgggtctatctacatatggtcaagagtaggagcagatatt
gtaagcactctaagagaacactctgcacctgttcttgcttgttcatggagtgagttggga
aagcctctagcctctgctgataagaatggaaatctctgtatatggacgtga
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integrated database retrieval system
