Macadamia integrifolia (macadamia nut): 122068772
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Entry
122068772 CDS
T07436
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122068772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122068772
03009 Ribosome biogenesis [BR:
ming03009
]
122068772
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122068772
Spliceosome [BR:
ming03041
]
Complex A
U1 snRNP components
U1 related factors
122068772
Complex B
122068772
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
Pre-60S particles
Helicases
122068772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
Motif
Other DBs
NCBI-GeneID:
122068772
NCBI-ProteinID:
XP_042488594
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MATAEPASASLGPRYAPDDPTLPMPWKGLIDGSTGLSYYWNPETNITQYEKPATLPLQFP
SGPIPAASVPQLAPIPMSQTMQGQKLTQATQQQGQQMLQVKEQTGQLLPAQPVQQFIQTQ
QQGPQMAQAVQETPQLMQTEQHQCQLMQQQCRQQMLQMPYQQLPPQMLQQMPQQLSQETP
QNQGQQFSHQQLQKIQYQQSSLSPGLQISQPRAQQIAHQHGPQILQQQAQPIPHRRMQPF
SHHQGQRMGFPLKEETEFQRGNQFAFFPSQVQNLPTGYSVQGPHMGIQSAHAQQFGNSSG
STQTTSSLVQSQHAVTDHMHWQQVGQQMGGSVENQVGPIMMHRQQSVGTPYGLKMGCENP
HESGGSRYGLRTGYEDSHRRSGNDVYINANKEGSVMFPQQPKLAAIPMEQNQQEIRIDAV
PPHNPTPGHPGGLNIAGNLMPNLYNHEASARIPAFSNSATMRSPRMLSSSDIGNLSPVEA
YCQQHEVTATGDNVPAPFMTFEATGFPPEILKEIHFAGFSSPTPIQAQTWPIALQSRDIV
AIAKTGSGKTLGYLIPAFVHLRQCRNNPQKGPKVLVLVPTRELATQIQDEVIKFGRSSRV
SCTCLYGGAPKGPQLRELDRGADIVVATPGRLNDILEMKKIDFHEISLLVLDEADRMLDM
GFEPQIRQIVNEIPPCRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGSVDELAANKAITQ
YVEVVPQMEKQRRLEEILKAQERGSKVIIFCSTKRLCDQLARSIGRVFGAAAIHGDKSQG
ERDWVLNQFRSGKSPILVATDVAARGLDIKNIRVVVNYDFPTGIGDYVHRIGRTGRAGAT
GVSYTFFSDQDWKYAADLIKVLEGANQRVPPEVREMAVRGGPIVGKGRSGMSRWDSGGRS
DSGGRGGFVARGGRNDFFGGRGNQGRGFGGPRRGRHERGPCDRYGSMNGRGRYDNRGADR
NRGGSNSRTYSRSPDLARTWDYDRSRSRSRSRSWSWSRSRSWSRSRSHSSSSSHERYERS
RGQRDVGPMEPIYVAPEESRMSSGATPGGPFLGVEPAIQQPVVDNTGPAHPVMVAEPDYH
PAAEP
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggctactgccgagccagcttcagcttctttgggccctcgatatgcacctgatgatcca
actcttccaatgccctggaaagggttgattgatggaagtactggcctttcatactactgg
aatcctgaaactaatatcactcagtatgaaaaacctgctacattaccattacaattccca
tccggcccaattcccgcagcttctgtgccacagctagctccaataccaatgtcccagaca
atgcagggccagaaactgactcaagccacacaacagcaggggcaacagatgctccaagtt
aaggaacagactggacaattactgccagcgcagccggtccaacaattcatccagactcaa
cagcagggtcctcaaatggcacaagctgtacaagaaacgccacaattgatgcaaactgag
caacatcaatgtcagcttatgcaacagcagtgtaggcagcagatgttacagatgccctat
cagcagttgcctccacagatgctgcagcaaatgcctcaacagctgagtcaggagacaccg
caaaatcaagggcagcaattttcacaccagcagctacagaaaatacagtatcaacaaagt
tcactttcaccaggacttcaaatttcacaaccacgggcacaacagattgcacatcaacat
ggaccacagattctacagcagcaggcacagccaatcccacatcgacggatgcagccattc
tctcatcatcaagggcagagaatggggtttcctcttaaagaggaaactgaatttcaacga
gggaatcaatttgcattttttccatcgcaggtccagaacctgcctactggatattctgtt
cagggtccacatatgggaattcagtcagctcatgcccaacaatttggtaattcttctggc
agtacacaaactacatcttctttggttcagagtcagcatgctgtaactgatcatatgcac
tggcaacaagtggggcaacaaatgggtggttccgtggagaatcaagtggggccaataatg
atgcatagacaacaatctgttggaactccttatggactgaaaatggggtgtgaaaatcct
catgaatctggtggatctcgttacggattgagaacggggtatgaagattctcatagaaga
tctggcaatgatgtttacattaatgccaataaggaagggtcagtgatgtttcctcagcaa
ccaaaacttgctgccatccccatggagcagaatcagcaggaaatcaggatagatgctgtt
cctcctcataatcctacccctggtcatcctgggggattgaatatagcaggcaatttaatg
cctaacttgtacaatcatgaagctagtgccagaattccagctttttccaacagtgcaact
atgagatctccaaggatgcttagctcctcagatattggaaatctttcacctgtcgaagca
tactgtcaacaacatgaagttactgcaacgggtgacaatgttcctgctcccttcatgacc
tttgaagcaactggtttccctccagagatactcaaagagatacattttgctggcttctct
tctccaactccaatacaggcacagacatggccaattgcactacagagtagagacatagtg
gccattgcaaaaacgggttctgggaaaaccttgggctatctcattcctgcctttgttcat
ctgaggcaatgccgaaataaccctcagaagggtccaaaggttttggttctggttcctaca
cgtgagcttgcaacacaaatacaagatgaggttatcaagtttggtcgttcttctagggtc
tcttgcacttgtttatatggtggagctccaaaaggtcctcagcttagagaattagataga
ggggcagatattgttgttgccacccctggtcggctcaatgatatcctcgaaatgaagaag
attgactttcatgaaatatctctccttgttcttgatgaggcagatcgaatgcttgatatg
ggctttgaacctcaaatccgccaaattgtgaatgagatacccccatgtaggcagactctc
atgtacactgcgacctggccaaaggaggtcaggaaaatagcaggagatctacttgtcaat
cctgttcaggtgaacattggcagtgttgatgaacttgcagcaaacaaggccatcacacag
tatgtggaagtagtcccacaaatggagaaacagaggcgcttagaagagattcttaaagcc
caagaacgtgggtcgaaggtcataatcttctgctcaacaaagaggttgtgtgaccagctt
gcacggagcattggccgcgtttttggtgctgctgcaattcatggagacaaatcacagggt
gagagggactgggttctcaatcagttccggagtgggaagtctccaatactggttgccaca
gatgtggctgctcgagggcttgacattaagaacatcagggttgtggttaactatgatttt
ccaacgggaataggagattatgtccatcgaattggaagaactgggagggctggtgcaaca
ggggtatcatacaccttcttttctgatcaggattggaagtatgcagctgatctgataaag
gttttggagggggccaaccagcgagttccacctgaagtgcgagagatggctgtacgtggt
gggcccatcgttggcaaggggcggagtgggatgagtcgttgggattctggtgggcgttca
gattctggtggtcgtggtggctttgttgcccgtggtgggcggaatgacttttttggtgga
aggggaaatcagggacggggatttggtgggcctcgtagagggaggcatgaacggggacca
tgtgatcgttatggaagtatgaatgggagggggcgatatgataatagaggagcagatagg
aatcggggtggtagtaatagcaggacttacagtcgcagccctgatttggctcgcacctgg
gattatgacagaagccgaagccggagccggagccggagctggagctggagcaggagcagg
agttggtcccgtagtcgcagccacagcagtagcagcagccacgaaagatatgagagatca
cgtggacagagggatgttggtcctatggaaccaatatatgttgctcctgaagaatcaaga
atgtcctctggagcaacaccaggtggcccattcttgggagttgagcctgcaattcagcag
cctgtagttgataataccggacctgctcatcctgtgatggtggcagagccagattatcac
cctgcagctgaaccttag
DBGET
integrated database retrieval system
