Macadamia integrifolia (macadamia nut): 122069390
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Entry
122069390 CDS
T07436
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122069390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122069390
03041 Spliceosome [BR:
ming03041
]
122069390
03036 Chromosome and associated proteins [BR:
ming03036
]
122069390
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122069390
Spliceosome [BR:
ming03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122069390
Complex B
122069390
Complex C
U2 SnRNP specific factors
122069390
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122069390
TFTC complex
122069390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
122069390
NCBI-ProteinID:
XP_042489326
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYSLTLQRATGVVCATNGNFVGGKSQEIVVARGKVLDLLRPDENGKIQTILSVEVFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQFL
AVDPKGRAVMIAACEKQKLVYVLNRDTSARLTISSPLEAHKSHTIVYSVCGVDCGFDNPI
FAAIELDYSEADQDSTGQAANEAQKHLTFYELDLGLNHVSRKWSGPIDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQ
TEYGDIFKVTLEHEKDHENERVTELRIKYFDTMPVTAAMCVMKTGFLFAASEFGNHALYQ
FKAIGDDVDVESSSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPVMDMKVSNLFEE
ETPQIFTLCGRGPRSSLRILRPGLAISEMAVSQLPGIPSAVWTVKKNLNDEFDAYIVVSF
ANATLVLSIGETVEEVSDSGFLDTTPSLAVSLLGDDSLMQVHPNGIRHIREDGRINEWKT
PGKRTIVKVASNRLQVVIALSGGELIYFEMDMTGQLMEVEKHEMSGDVACLDIAPVPEGR
QRSRFLAVGSYDNTIRILSLDPDDCMQVLSVQSVSSPPESLLLLEVQASIGGEDGADHPA
SVFLNAGLQNGVLFRTVVDMVTGQLSDTRSRFLGLRAPKLFSCIVRGRRAMLCLSSRPWL
GYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVIPL
RYTPRKFVLHPKRKLLVTIESDQGAFTAEEREAARKEFLEAAGMGENANGNLEQMENGDD
EDKDDPLSDEQYGYPKAESDKWVSCIRVLDPRSASTTCLLELQDNEAAFSICTVNFHDKE
YGTLLAVGTAKALQFWPKKRFTAGFIHIYRFVEDGKSLELLHKTQVEGIPLALCQYQGRL
LAGIGPVLRLYDLGKRRLLRKCENKLFPNTIISIHTYRDRIYVGDMQESFHYCKYRRDEN
QLYIFADDCVPRWLTASHHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGKIKWEQ
GKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGDCIIYGTVMGSLGALLAFSSREDVD
FFSHLEMHMRQEHPPLCGRDHMAFRSAYFPVKDVIDGDLCEQFPTLPADMQRKIADELDR
TPGEILKKLEDIRNKII
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctcaccctgcaaagagccactggagtcgtctgtgccaccaatggg
aacttcgtcggtggaaaatctcaagagattgttgtggcaagaggtaaagttcttgatctt
ttgcgacccgacgagaatggcaagatccaaactattctctccgtcgaggtcttcggtgct
atccggtccttagcccagtttaggttaactggttctcagaaagattacatcgttgttggc
tccgattccggccgaatcgtgatactcgagtataacaaagagaagaatgttttcgataag
attcatcaagagactttcgggaaatctggttgtcgtcgcattgtaccggggcaatttttg
gctgttgatcccaagggccgtgcggtaatgattgctgcttgcgagaagcagaagctcgtt
tacgttttgaacagggatacttctgcgaggctgaccatttcttcacctttagaagcccat
aagtctcacaccattgtgtattccgtttgcggtgttgattgcggttttgataaccctatt
ttcgctgccattgagctcgattattccgaagctgaccaggattccactgggcaggcagca
aacgaggctcagaaacaccttaccttctatgagctcgatcttggactcaaccatgtctcc
agaaaatggtcgggacctattgacaatggtgccaacatgctcgtcacggttcctgggggt
ggggatggccctagtggtgtccttgtctgtgctgagaactttgttatttataagaaccaa
ggccaccctgatgttcgagctgttattcctagacgagctgatttaccagcggagcgtgga
gtgctcatagtatctgctgctactcacaggcagaagtctatgttcttctttttgttgcag
acagagtatggggatatatttaaggtcacactagaacatgaaaaagaccacgaaaatgaa
cgcgttactgagctgaggattaagtattttgatacaatgccagttaccgctgcaatgtgc
gttatgaaaaccgggtttctgtttgctgcttcagagtttgggaatcatgctttgtatcag
tttaaggcgataggagatgatgtggatgttgaatcttcatcagctacactgatggaaaca
gaggaaggtttccaacctgtattcttccagcctaggggtcttaagaaccttgtgaggatt
gaccaagtggagagcttgatgccagtcatggacatgaaggttagtaatctctttgaggaa
gaaacccctcagatattcacactttgtggccgaggccctcgttcttctttgcggatactg
agaccaggtttggccatcagtgagatggctgtttctcaactccctggtattccgagtgct
gtttggactgtgaagaagaatttgaatgatgaatttgatgcatacattgttgtatcattc
gctaatgcaacccttgtgctttcaattggtgagacggttgaagaagttagcgatagtggg
tttcttgacactacgccatctcttgctgtttctttgttaggagacgattctctaatgcaa
gttcatcccaatggtattaggcatataagggaagatggacgtattaatgagtggaaaact
ccagggaaaaggacgatagtgaaggttgcctccaataggcttcaagtggtcattgctcta
agtggaggggagcttatctattttgagatggacatgacaggtcagttgatggaggttgaa
aagcatgaaatgtcaggtgatgtagcttgtctagacattgctccagtccctgaaggacgg
cagaggtcccgtttccttgctgttgggtcatatgacaatacgatccgcatcctatctttg
gatcctgatgattgtatgcaggttttgagtgtgcagagtgtgtcttctccaccagaatct
ctcctcttacttgaagtgcaggcatctataggtggggaggatggtgctgatcacccagct
agtgtttttcttaatgctggtttacagaacggtgttctgttcagaactgtagttgatatg
gtgacaggtcagctttccgatacccgttcccgcttcttaggactgagagcccccaaactt
ttctcttgtattgtgagaggaagacgggcaatgctttgcctgtcaagtcggccttggctt
ggttatattcaccaagggcattttttgttgactcccctttcatatgagactcttgaatat
gctgcctcgttttcatctgatcagtgtgccgaaggtgttgttgccgttgctggggatgca
ttaagagttttcacaattgagcggctgggagagacattcaatgaaactgtgatacctctg
agatatactccaaggaagtttgtccttcaccccaagcggaaactgttggtcacgattgag
agtgatcagggagcatttactgcagaagagcgtgaagctgcaagaaaggaattcttggag
gcagctgggatgggggagaatgcaaatggtaatttggaacagatggaaaatggtgatgac
gaggataaggatgatcctctttctgatgagcagtatggctatccaaaggcagagtcggac
aagtgggtttcttgcatcagagttcttgatccgaggagtgctagcacaacctgtctgtta
gagctccaggataatgaggctgcatttagtatctgtactgtaaatttccatgacaaggaa
tatggaactctcttggcagttggtacagcaaaagcgttgcagttttggcccaagaaaaga
tttacagcaggattcattcatatctatagatttgtggaggatgggaaatcccttgaactt
ctgcacaagacacaagtagagggcattcctctagctttgtgccaataccaaggaagatta
cttgctggcattggacctgtactcagattatatgatctagggaagaggagattgctgaga
aagtgtgaaaataagcttttccccaacacaattatctctattcacacataccgtgaccgg
atttatgttggtgatatgcaagagtcattccattactgcaagtacagacgggatgagaat
cagctttatatatttgcagatgattgtgttcccagatggcttacagcatcccaccatata
gactttgacaccatggcaggtgccgacaagtttggaaatgtgtactttgtgcgtttacca
caggatgtctcagatgagattgaggaagatccaacaggagggaagataaagtgggagcaa
gggaagctgaatggggctccgaacaaggtagaggagattgtacaattccatgtgggtgat
gtggtcacatgtttgcagaaggcatctctcataccagggggtggtgactgcatcatttat
ggaactgtcatgggcagcttgggagctttgcttgctttctcatccagggaagatgttgac
ttcttttctcatctggagatgcatatgaggcaggagcacccacctttgtgtggcagagat
cacatggccttcagatcggcctacttcccagtgaaggatgtgattgatggagatctgtgt
gaacagttccccacactgcctgcggatatgcagaggaagattgcagatgaactggataga
actccaggggagatactgaagaaacttgaagacatcaggaataagatcatatga
DBGET
integrated database retrieval system
