Macadamia integrifolia (macadamia nut): 122069520
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Entry
122069520 CDS
T07436
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122069520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122069520
03019 Messenger RNA biogenesis [BR:
ming03019
]
122069520
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122069520
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122069520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
122069520
NCBI-ProteinID:
XP_042489490
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MEDTEGGLSFDFEGGLDNSAANPAASAPLIPTDPSNAAAPVAPTAAEPVSGGLPGRRSFR
QTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRMYGECREQDCVFKHTNDDIKECNM
YKLGFCPNGPDCRYRHVKKEGPPPPVEEVFRQIQNLSSFNYGSNRFYQHRGAGYNQQMER
PQFQQGSTPVNQGVAVKPSMTADSAIVLQQQPQVQSQQQQVSQTQSQTQNLPNGVPNQAN
RTAIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVN
RTRHFQGCAKMTSKIGGFVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFDKTRHLRNPYN
ENLPVKISRDCQELEHSIGEMLASLLYLEPDSELMAISIAAELKREEEKAKGVNPENGVE
NPDIVPFEDNEEEEEEESEEEEESFGQALGASQGRGRGRGLMWPPHMPLGRGARPMPGVR
GFPPVMMGTDGFTYGAVTPDGFSMPDLMGPRAFAPYGPRFSGDFTGIGQNPAMGFTPMDG
TGPTSGMAFRGRPSRPGAVFPANGLGMMMGSVRPPFMGSMGMSAGGPVRGGRPMGMPPFR
PPVPPPPSQNNRVVQRDQRRLTNDRNDRYSAGSDQGKGQEVVGPSGGPDEEMKHQPGLRA
QHEDSFGAGNSFRNDESESEDEAPRRSRHGEGRKRR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaccgaaggaggtcttagcttcgacttcgaaggcggcctcgataacagtgct
gccaatcctgctgcttctgcacctttgatcccaaccgatccctccaatgccgccgccccc
gtcgctccaaccgctgcagagccagtctccggaggtctcccgggacggagaagtttccgg
cagacagtatgtcggcactggcttcgaagcctctgtatgaagggcgatgcctgtggtttc
cttcaccaatacgacaagtcacggatgcccatatgtcgattcttccgaatgtatggagag
tgtcgcgagcaagattgtgtttttaagcacaccaacgacgacatcaaggagtgtaacatg
tacaagttaggtttttgtccaaatggtcctgactgccggtatagacatgtgaaaaaagaa
ggacctccacctcctgtggaagaggtttttcggcaaattcagaatttgagttcattcaat
tatggctcgaacagattttatcaacaccggggtgctggttataaccaacaaatggaaaga
cctcagtttcaacaaggttctactcctgtcaatcaaggtgtagcagtaaaaccatctatg
actgctgactctgcgattgtgctgcaacagcagccacaagttcagtctcaacaacagcag
gttagccagactcagtctcagacgcagaatcttcctaatggtgtgccgaatcaagccaat
agaactgctataccgcttcctcaaggtccatctaggtacttcattgttaaaagttgtaat
cgcgaaaatttggaattatctgtgcaacaaggagtgtgggcaactcaaaggagcaatgag
gctaaactaaatgaagcttttgactcagtggagaatgtaattttgatattttctgtcaac
cgaacacgccatttccagggatgtgcgaagatgacatctaaaattggtggatttgttgga
ggaggaaattggaaacatgcacatggtactgcacattatggacggaatttctcagtgaaa
tggttgaagctatgtgagttgtcctttgacaaaactcgccatttgaggaatccatacaat
gaaaaccttccagtaaagataagccgagattgccaggaattagagcactctattggtgaa
atgttggcttccctactctatcttgaaccagatagtgagctcatggcaatctcaattgca
gctgaattgaaacgggaggaggaaaaagcgaagggagtcaatccagaaaatggggtagaa
aacccagacattgtaccttttgaggataacgaagaggaggaagaggaagaaagtgaggaa
gaggaggagagctttggtcaagctcttggtgcatcccagggcagaggaaggggtcgagga
ctaatgtggcctccacatatgcctctaggacgcggagcgagaccaatgcctggcgtccgg
ggcttccctcctgtcatgatgggcaccgatgggtttacttatggtgctgttactcctgat
ggattttctatgccagatcttatgggtccacgtgcctttgcaccttatggcccaaggttt
tctggggacttcactggcattggtcagaatccagcaatgggcttcacacctatggatgga
acaggccccacttcaggcatggcttttcgtgggcgcccttcccgccctggagctgtcttt
cctgcaaatgggcttgggatgatgatgggttctgttcgtcccccatttatgggttcaatg
ggaatgtctgccggaggtccagttcgaggcggtcggccaatgggtatgcctccattccgt
cctccagtaccacctccaccttcacagaacaatagggttgtacagagagaccagaggaga
ctaacaaatgacaggaatgatagatacagcgcaggttcagaccagggcaagggtcaggag
gtggtgggtcctagtggtggaccagacgaggagatgaagcatcagccaggccttagggcc
caacatgaggattcttttggggcagggaacagctttagaaatgatgaaagtgagagtgag
gatgaggcgccaaggcgttcgaggcatggagagggaaggaagaggcggtga
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integrated database retrieval system
