Macadamia integrifolia (macadamia nut): 122070512
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Entry
122070512 CDS
T07436
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122070512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122070512
Membrane trafficking [BR:
ming04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122070512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
zf-RING_Vps41
Beta-prop_WDR5
zf_RING_Vps8
WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_THOC3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122070512
NCBI-ProteinID:
XP_042490610
LinkDB
All DBs
Position
Unknown
AA seq
2055 aa
AA seq
DB search
MTKNLNSRPPTELLDLDSLLQTSSDDESDDLHGIHLRTVDEILNDSDSSXSSPSSPSSPS
SFTSAVLRRRLFSDLSSDKNSISVTKDDNPSHEEEEDDAASVSSPEVDILSASQISTVHQ
VPKSPESETLNSVDASKITPLSRRKPGELLANSSLGRNNGSATRPFPSLFGGVKPNPKPG
AALAAAAAASRSIPTPHAAAIKSRRASSGILETVLHTEGQQLGLPVGDPGMGLDRSLDFE
SSVHSVDDVSNGNGSGIAQLDEKFIQENEGFVVSQSFVAEKMGAEEGEAAEISHGINGKM
VAEERPMELLHAPESDGVGLHSEENLSNSTSSNVTAFVEPRITSSPREGEASKLEENSTI
SSPIDVNQANITYVEEESAHTLEVDICLSSSSSEKYNPSSTRYEMVSKLGEDVMPSELEN
VEKSISADTKHGEVVFAAEDTSSRSDMTELVEDGTFHLENKKGSKRTGKKSRLSKKPLEL
AEELEKKHASSGLHWEEGAAAQPMRLEGIRRGPPAVGYLQIDPNNAITRAIQSQVFKREH
GSPQVLAIHANFIAVGLSRGFVIVVPSKYSAHTADNMDAKMLMLGSQGDKSLSPVTSMCF
NHLGDLLLVGYGDGHVAVWDVQREVAMKVISGLHSAPVVHTLFLGQDSQVTRQFKVVTGD
SKGLVLLHAFSVVPLFNRVTIKTQCLLDGQKTGTVLSASPLLIDDSFGGSVTSAFGNSVA
SSNGIGSMVGGVVGGVVGGDAGWKLFSEGSSLVEEGVVIFVTHQTALVVRLSPGLEVYAQ
LSRPDGVREGSMPYTAWKYMKQSRGSSTEDVPGEILERASLLAIAWDRKVQVSKLVKSEL
KVYREWTLDSTAIGVQWLDDQMLVVLTLRGQLCLFAKEGTELHRTSFAVDDSRVDDLITY
HTHFSNIFGNPEKAYHNCVAVRGATIYILGPMHLVVSRLLPWKERIQVLRRAGDWMGALD
MSMRLYDGHAHGVIDLPRAPDAIRETIMPYLVELLLSYVDEVFSYISVAFCNQLGKVEEV
DEPKSRSISVHSEMEEQFARVGGVAVEFCVHIKRTDILFDDIFSKFVAVQHGGTFLELLE
PYILKDMLGFLPPEIMQALVEHYSRKGWLQRVEQCVLHMDISSLDFNQVVKLCREHGLYG
ALIYLFNRGLDDFRAPLEELLMVVQNSQMENAVAIGYRMLVYLKYCFSGLAFPPGHGTIP
SARLPSLRAELVQFLLEDANAPNLQVSSTIKSSTGGFPNLYHLLLLDTEATLEVLSCAFV
QEEVPISDHSLHGLVNNNVQDGIKDNEDNNGKIENPNMMVQNTINTLIHILDLEKSEVER
FSSIDDAGSQEIWPSKKDMGHLLEFIAYFVACKSAVVSKNVLNHIFEFLTLDDNISPSVP
GQKTEISKRREKQVLALLKVLPETDWSSSFVLHLCEKAQFYQVCGLIHASRGQYLAALDS
YMKDIDEPVHAFSFINITLLQLGDTESADFRSAVISRIPELVNLSREGTFFLVVDHFNKE
SINILSELRSHPKSLFLYLKTTVDVHLYGTLDFSSLEKGGQLDLPNGRRIKDQSNEVEAY
LARISEFPKLLRHDPVNVTDEIIELYLELLCQYERNSVLRFLETFESYRVEHCLRLCQEY
GVIDAAAFLLERVGDVGNALSLTLSCINEKFIMLSAAVERTLSDVPSSGFTEMDLLNTFR
RVKEVDVIRDILHSSIGLCQRNTHRLDIEESESLWFQLLDSFCGPLKDSCDDKIVVEGNP
TGMLSSSLFGMQEDKDVLNTWRISKSKRSAHILRRVFSQFIRMIVDGMIGYVRLPRIMAK
LLSDNGSQEFGDFKLTILGMLGTYSFERRILDTAKSLIEDDTFYTMSLLKKGASHGYAPQ
NLICCICSSLLTKGKSDSSIRVFSCGHATHLQCEFHENKALNKGVLVGCPVCVPEKNERS
RSKSVFSDNGLVNNYLLRNQQAQRTIPHHSHEPEGLEKPYGLQQISRFEILSSLQIAQKT
LQIEYLPPLKLAPPAIYHEKVQKGTDVLSGESSSTPAKSEKPSKNKQLRELKMKGSSIQF
PLKSSIFGNEKMRRG
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaacctgaatagtagacctccgacggagctgcttgaccttgattcccttctc
cagaccagtagcgacgatgaaagcgatgacctccatggtatccatcttcgcactgtcgat
gaaatcctcaacgactccgattcttccnnttcttctccttcttctccttcatctccatct
tcatttactagtgccgtcctccgacgcaggctcttctctgatctctcctccgataaaaat
tccatttctgtcactaaagacgacaacccttctcacgaagaagaagaagacgacgccgct
tcggtaagtagtcctgaagttgatatcctttcagcctctcaaatttccacagttcatcaa
gtcccaaagtctccagaatcggaaacccttaattcagtggacgcatctaagatcacccct
ctcagtaggaggaaacctggggaattgcttgctaattcctccttagggcgtaataatggt
agtgcaactcgtcccttcccttccttgttcggaggtgttaaacccaatcccaagcctgga
gccgctcttgcagctgctgctgcagcttcacgctccatcccaactccccatgctgctgcc
atcaagtcgagaagagcgagtagtggcattcttgagacggttctacatacggaagggcaa
caactgggtcttccggttggtgatcccgggatggggttagatagaagtctcgattttgaa
tcgtcagttcattcagtcgatgatgtttccaatggtaatggatccggaattgcacagttg
gatgagaaattcattcaggaaaatgagggattcgtagtctctcaatcttttgtggcagaa
aagatgggcgcagaagaaggtgaggctgcagaaatctcgcatgggatcaatggaaagatg
gttgcagaagagaggcctatggaactactgcatgctcctgaatcggatggggttgggtta
cattctgaggaaaatttatcaaattctacttcttcaaatgttacagcctttgttgaacca
cggatcacttcttcccctagggagggagaggcttctaagctggaggagaactctactatt
tccagtccaatagatgttaaccaagcaaacattacttatgttgaagaggagagtgctcat
actctggaggtggatatttgtctttcatcctcttcttctgagaagtataatccttcttcc
actaggtatgaaatggttagcaagcttggggaggatgtgatgccttcagaattagagaat
gtcgagaagagcatatcagctgacaccaaacatggagaagttgtttttgctgcggaggac
accagttccagaagtgacatgactgagcttgttgaagacggaacttttcacctggagaac
aagaaggggagcaaaagaacaggaaagaaatcacggttatctaagaagccactggaatta
gctgaagaactcgagaaaaaacatgcatcttctggtttgcactgggaagagggtgctgct
gcccagccaatgagacttgaaggtatccgaagggggccacctgctgttggatatttgcaa
attgaccccaacaatgcaattacccgagccattcaatcacaagtattcaagcgtgaacat
ggctccccacaagtcctggccattcatgccaacttcattgcggtgggcttgtcaaggggg
tttgtcattgttgtgcccagtaaatattctgctcatactgctgataatatggatgctaag
atgttgatgcttggttctcaaggtgacaagtctctttctccagtaacttccatgtgcttc
aatcatttgggagacctgcttttagtaggatatggtgatggtcatgtggcagtttgggat
gtccagagggaagtggcaatgaaagtaattagtgggttgcattcagcaccagtggttcat
acactgtttctagggcaagattctcaagttacacgacagttcaaagtagttaccggtgat
tctaaagggcttgttctgttgcatgctttttcggtggtacccttgttcaatagggttaca
atcaagacacagtgtcttcttgatgggcaaaaaacagggactgttctttctgcttctcct
cttctgattgatgattcttttggaggttctgtgacatctgcctttggaaactctgtggct
tctagcaatggtatcggtagcatggtgggaggtgtcgttggaggtgttgttggaggagat
gctggttggaaactctttagtgaagggtcttctttggtcgaagaaggtgtggtcatattt
gtcacacatcaaacggctctggtggttaggcttagtcctggtttggaagtctatgcacaa
ctttctaggcctgatggtgtccgggaaggttccatgccatacactgcatggaaatacatg
aaacaatcccgtggttcctccactgaagatgtgcccggggagatattggaaagagcttcg
ttgcttgcaattgcatgggatcggaaagtccaagtatcaaagttggttaagtcagagtta
aaagtatatagggaatggactcttgatagtaccgcaattggagtacagtggttggatgat
cagatgttggtagttctaacgttgagaggacaactctgtttgtttgcaaaggaagggact
gagcttcaccgaacaagttttgcagtagatgattccagagtagatgatctcataacatat
catactcacttttcaaatatttttgggaaccctgagaaggcttatcataattgtgtagct
gtacgaggagctacaatatacattcttgggcctatgcatcttgtggtttctcgtcttctc
ccatggaaggagcgtattcaggttttgcgaagggcaggtgactggatgggtgcattggac
atgtcaatgaggctctatgatggtcatgcacatggtgttattgatctccctcgagcccca
gatgcaatacgagaaaccataatgccttatctggtagaattgcttttatcctatgttgat
gaagttttttcttatatttctgtggcattctgcaaccaacttggaaaggtcgaagaagtt
gatgaaccaaagagtagaagtatttctgtccattctgagatggaagagcaatttgcccgt
gtcggtggtgttgcagtagaattctgtgtccatatcaaaaggactgatatccttttcgat
gacatcttctccaaatttgtggctgttcaacatggaggtacattcttggagcttttggag
ccatatatattgaaggatatgcttggatttctaccccctgagataatgcaagcgctggta
gagcattacagccgcaaaggatggttgcaacgtgttgaacagtgcgttcttcacatggac
atttcttccttggatttcaaccaggtggtcaagttgtgccgagagcacgggttatacggt
gcccttatatatcttttcaacagaggtttagatgattttcgggcacctttagaggaactc
ttgatggttgtgcaaaatagccagatggaaaatgcagttgctataggatataggatgctt
gtttatctgaagtattgcttttcaggtcttgcttttcctccaggtcatggaaccattcct
tccgctcgtttgccatcacttagggcagaacttgtgcagtttctgctggaggatgctaat
gcccccaatttgcaagtttcatcaaccatcaaatcatccactggaggcttcccgaacctg
tatcatctcttattattggatactgaagcaactttggaagtactgagttgtgcttttgta
caggaagaagttccgatatctgaccattctttgcatggcttggtcaacaataatgtgcag
gatggcattaaggataatgaggacaacaatggaaagattgaaaatccaaatatgatggtc
cagaataccattaacacccttattcatattcttgatctggaaaaatctgaagtggaaagg
ttttctagcatagatgatgctggatcccaagaaatatggccttcaaagaaagacatgggc
catttactagagtttattgcttattttgtagcgtgtaaaagtgctgtggtctcaaagaat
gtattgaatcatatttttgagttcttgacattagatgacaatatctcaccaagtgttcct
ggtcaaaaaactgaaatttctaaaagaagagagaaacaggtgcttgcccttctgaaagtg
ttacctgaaacagactggagttcatcgtttgtgttacatctatgtgaaaaggcacaattt
taccaggtttgcggcttaatacatgctagcaggggccagtatcttgcagctttagatagc
tatatgaaagatatagatgaacctgttcatgccttttcctttatcaatatcacgttgcta
cagttgggggacactgaatctgctgatttccggtcagcagttatttctcgaattcctgag
ctggttaacttaagcagagaggggactttctttttggttgttgaccatttcaataaagaa
agcattaatatcctgtctgaactccgctctcatccaaaaagcctttttctttatttaaag
acaactgttgatgttcatttgtatggcacacttgatttttcttctttggagaaaggaggt
cagctggatctcccgaatggaagaaggataaaggatcagtcaaatgaagttgaagcgtat
ttggcaaggatctctgaattcccaaagcttctacgtcatgatcctgtaaatgtaactgat
gaaattattgaactttatcttgagctgttgtgccagtatgagcgcaattcagttctcagg
ttcttggaaacttttgaaagctatagggtggagcattgtctacgtttatgccaggaatat
ggggttatagatgcagctgccttcttactggaaagagtgggtgatgttgggaatgcttta
tcacttactctgtcttgcatcaatgaaaaattcatcatgcttagtgctgctgttgaaagg
acattatctgatgtgccttcaagtggatttactgagatggatcttctcaacacttttaga
agggtgaaggaggtggatgttatacgtgatatattgcattcctctattggattatgccag
cggaacacacaccgcttggacattgaagagtcagaatccctctggttccagcttctggac
tcgttttgtggacctttaaaagattcttgtgatgataaaattgtcgttgaaggaaatccc
actggcatgctatcatcatcattgtttggtatgcaagaggataaagatgttttgaatact
tggaggatctcaaaatccaaaagaagtgctcatattttacggagagtgttttctcagttc
atcaggatgattgttgatggaatgattggatatgtacgccttccaagaatcatggctaaa
ctcctttctgacaatggtagccaggagtttggtgattttaaactcacaatattgggaatg
ctgggcacatacagctttgagagaagaattctggacacggccaaatccttgattgaggat
gatacattctatactatgagtctacttaagaagggggcttcccatggatatgccccacag
aatctcatatgctgtatatgcagctcccttcttaccaaggggaaaagtgattcaagcatt
cgagtgttcagttgtggtcatgcaacccatctccaatgtgaatttcatgaaaacaaggca
ttgaacaagggtgtcttggttggatgccctgtttgtgtgcctgagaagaacgaaagatcc
agaagtaaatcagtcttttcagataatgggctggtcaataattatttattgagaaatcaa
caagcacaaaggactattcctcatcactcacatgagccagagggattggagaaaccttat
gggctccagcaaatttctcggtttgaaatcttgagtagtcttcagattgcccagaagact
ctccaaatagaatacttgcctccattgaagcttgcaccacctgctatctatcatgagaag
gtacagaaaggaactgatgttttaagtggagaaagtagcagcactccagcaaaaagtgaa
aaaccaagtaaaaataagcaactaagggagctgaagatgaaggggtcatcaattcagttc
cccttgaaatctagtatatttggaaatgagaagatgagaaggggataa
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integrated database retrieval system
